Factsheet for HORVU3Hr1G036380.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G208300.2	Wheat	cytosol	91.91	92.1
TraesCS3D01G183900.2	Wheat	cytosol	92.32	89.0
TraesCS3A01G176500.1	Wheat	cytosol	92.12	88.8
Os01t0261200-01	Rice	cytosol	58.71	57.87
GSMUA_Achr6P03200_001	Banana	cytosol	25.31	57.28
KXG32209	Sorghum	endoplasmic reticulum, nucleus, peroxisome	57.88	53.86
Zm00001d040318_P001	Maize	cytosol, endoplasmic reticulum, nucleus	57.26	53.38
Zm00001d008308_P002	Maize	plastid	37.14	41.63
HORVU5Hr1G087850.4	Barley	nucleus	19.92	39.02
HORVU0Hr1G000630.1	Barley	nucleus	19.71	35.71
GSMUA_Achr5P23620_001	Banana	nucleus	38.17	34.52
HORVU5Hr1G087840.5	Barley	nucleus, plastid	20.75	30.12
HORVU7Hr1G033990.1	Barley	nucleus	20.33	28.0
HORVU2Hr1G045580.1	Barley	nucleus	20.12	27.71
HORVU2Hr1G127510.1	Barley	nucleus	21.99	26.37
HORVU2Hr1G127550.1	Barley	nucleus	21.99	26.37
HORVU1Hr1G049840.3	Barley	cytosol	18.88	25.49
HORVU1Hr1G065570.2	Barley	nucleus	20.75	23.2
HORVU7Hr1G060310.1	Barley	nucleus	25.73	19.2
HORVU4Hr1G085320.1	Barley	cytosol, nucleus, peroxisome	25.52	17.85
HORVU6Hr1G093050.4	Barley	cytosol, golgi, nucleus	22.82	17.16
HORVU7Hr1G070780.5	Barley	nucleus	23.65	16.19
HORVU5Hr1G074230.30	Barley	nucleus, plastid	20.75	13.19
HORVU5Hr1G086730.1	Barley	nucleus	6.02	9.54
HORVU5Hr1G086780.2	Barley	cytosol, nucleus	2.7	5.86
HORVU0Hr1G021100.1	Barley	cytosol, plastid	4.56	3.87

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	EnsemblPlantsGene:HORVU3Hr1G036380	EnsemblPlants:HORVU3Hr1G036380.1	InterPro:IPR003441	InterPro:IPR036093	UniProt:M0XJN9
InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF17
SUPFAM:SSF101941	TMHMM:TMhelix	UniParc:UPI000295C90F	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr3H:+:205571635..205576584

Molecular Weight (calculated)

53328.5 Da

IEP (calculated)

6.268

GRAVY (calculated)

-0.570

Length

482 amino acids

Sequence
(BLAST)

001: METLRAMALP PGFGFHPKDT ELVAHYLKKK ILGQKIEYDI IPEVDIYKHE PWDLPAKCNV PTQDNKWHFF AARDRKYPNG ARSNRATVAG YWKSTGKDRA
101: IKVDKRTIGT KKTLVFHEGR PPTGKRTEWI MHEYYIDENE CQACPDMKDA FVLCKVTKRI DWTSENGNEV GNNNPQPQQP NVAAILAVSV EQPDTAGSSI
201: IGGELPSDAA TVAIPAHTTP DGDADIQQWL EELIDPSFDP SANTVVDSVS AQLSPDEQNA ESSNIDAMAP KVEQDYASPN QTLADDTDFL LSDDIHSMLY
301: PGSDDFTSWQ HTYFTAADPF SLSNDFMDEF QMKELQLPLE NNGPNLSNEP AVVVRTRHGG TSATSVPPYK AKARLQQRLG RMVTSSSESI NQTIKFVDNN
401: GHLDLMTNVK HQKKHVRDIT SVKQSDAGKS SGNHNNQGFF RGVQRAFRGC SATGLNILVA LCMVGVAAAI LHHGRHRSGI SL

Best Arabidopsis Sequence Match ( AT1G65910.1 )
(BLAST)

001: MAPVSMPPGF RFHPTDEELV IYYLKRKING RTIELEIIPE IDLYKCEPWD LPGKSLLPSK DLEWFFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVTS
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I

Arabidopsis Description

anac028NAC028 [Source:UniProtKB/TrEMBL;Acc:A0A178W7T7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.