Factsheet for HORVU5Hr1G087850.4

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G353500.1	Wheat	nucleus	87.4	99.08
TraesCS5D01G360800.1	Wheat	nucleus	86.99	98.62
TraesCS5B01G356100.1	Wheat	nucleus	86.99	98.62
EER97157	Sorghum	nucleus	74.8	84.4
Zm00001d021423_P001	Maize	nucleus	72.76	82.11
VIT_17s0053g00740.t01	Wine grape	nucleus	65.04	67.23
CDX92153	Canola	nucleus	60.16	65.49
CDX95832	Canola	nucleus	60.16	65.49
Solyc03g098190.2.1	Tomato	nucleus	63.01	62.25
AT3G17730.1	Thale cress	nucleus	62.2	62.2
PGSC0003DMT400079749	Potato	nucleus	63.01	62.0
GSMUA_Achr9P23940_001	Banana	cytosol	60.57	61.83
Bra022236.1-P	Field mustard	nucleus	60.98	61.22
KRH09473	Soybean	nucleus	63.41	59.09
KRH38928	Soybean	nucleus	63.01	58.49
HORVU5Hr1G087840.5	Barley	nucleus, plastid	62.6	46.39
HORVU0Hr1G000630.1	Barley	nucleus	36.59	33.83
HORVU1Hr1G049840.3	Barley	cytosol	41.87	28.85
HORVU2Hr1G045580.1	Barley	nucleus	36.18	25.43
HORVU7Hr1G033990.1	Barley	nucleus	36.18	25.43
HORVU2Hr1G127510.1	Barley	nucleus	34.96	21.39
HORVU2Hr1G127550.1	Barley	nucleus	34.96	21.39
HORVU1Hr1G065570.2	Barley	nucleus	36.59	20.88
HORVU3Hr1G036380.1	Barley	cytosol	39.02	19.92
HORVU4Hr1G085320.1	Barley	cytosol, nucleus, peroxisome	54.06	19.3
HORVU7Hr1G060310.1	Barley	nucleus	40.24	15.33
HORVU6Hr1G093050.4	Barley	cytosol, golgi, nucleus	36.18	13.88
HORVU7Hr1G070780.5	Barley	nucleus	38.62	13.49
HORVU5Hr1G074230.30	Barley	nucleus, plastid	32.93	10.69
HORVU5Hr1G086730.1	Barley	nucleus	5.28	4.28
HORVU0Hr1G021100.1	Barley	cytosol, plastid	1.22	0.53
HORVU5Hr1G086780.2	Barley	cytosol, nucleus	0.0	0.0

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	UniProt:A0A287S5L5	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:HORVU5Hr1G087850	EnsemblPlants:HORVU5Hr1G087850.4	InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf
PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF50	SUPFAM:SSF101941	UniParc:UPI000B4866C2
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:579727017..579729752

Molecular Weight (calculated)

28464.1 Da

IEP (calculated)

6.305

GRAVY (calculated)

-1.029

Length

246 amino acids

Sequence
(BLAST)

001: AQQLDTVGKD KGERQRERSA TKEEANQEIM APVGLPPGFR FHPTDEELVN YYLKRKVHGQ SIELDIIPEV DLYKCEPWEL AEKSFLPSRD PEWYFFGPRD
101: RKYPNGCRTN RATRAGYWKS TGKDRSINYQ KRSIGMKKTL VFYQGRAPQG IRSNWVMHEY RIEESECNNT MGVQDSYALC RVFKKNVPAG EFEKQGECSS
201: SQAKGNQEQV TDFEEAGESS AANENDKDNS WMQFIVEDLW CSNKTK

Best Arabidopsis Sequence Match ( AT1G54330.1 )
(BLAST)

001: MAPMSLPPGF RFHPTDEELV AYYLDRKVNG QAIELEIIPE VDLYKCEPWD LPEKSFLPGN DMEWYFYSTR DKKYPNGSRT NRATRAGYWK ATGKDRTVES
101: KKMKMGMKKT LVYYRGRAPH GLRTNWVMHE YRLTHAPSSS LKESYALCRV FKKNIQIPKR KGEEEEAEEE STSVGKEEEE EKEKKWRKCD GNYIEDESLK
201: RASAETSSSE LTQGVLLDEA NSSSIFALHF SSSLLDDHDH LFSNYSHQLP YHPPLQLQDF PQLSMNEAEI MSIQQDFQCR DSMNGTLDEI FSSSATFPAS
301: L

Arabidopsis Description

ANAC020NAC domain containing protein 20 [Source:UniProtKB/TrEMBL;Acc:Q67Z40]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.