Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G519300.1 | Wheat | cytosol, nucleus, peroxisome | 94.48 | 93.8 |
| TraesCS4D01G345300.1 | Wheat | cytosol, nucleus, peroxisome | 94.92 | 93.7 |
| TraesCS4B01G350600.1 | Wheat | cytosol, nucleus, peroxisome | 93.9 | 93.63 |
| PGSC0003DMT400018364 | Potato | mitochondrion, nucleus | 13.5 | 80.17 |
| Os03t0119966-01 | Rice | nucleus | 73.88 | 78.31 |
| EER95621 | Sorghum | nucleus | 74.17 | 74.93 |
| Zm00001d048493_P004 | Maize | nucleus | 71.84 | 72.05 |
| Zm00001d027395_P009 | Maize | nucleus | 66.62 | 69.13 |
| GSMUA_Achr11P... | Banana | nucleus | 33.53 | 60.31 |
| GSMUA_Achr1P02820_001 | Banana | nucleus | 30.62 | 56.72 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.87 | 54.08 |
| HORVU5Hr1G087850.4 | Barley | nucleus | 19.3 | 54.06 |
| GSMUA_Achr8P13430_001 | Banana | nucleus | 44.7 | 50.74 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 40.35 | 50.0 |
| PGSC0003DMT400055322 | Potato | nucleus | 36.43 | 44.66 |
| VIT_04s0079g00280.t01 | Wine grape | cytosol, nucleus, plasma membrane | 42.24 | 43.56 |
| Solyc02g036430.1.1 | Tomato | nucleus | 35.7 | 43.54 |
| KRH17271 | Soybean | cytosol, nucleus, plasma membrane | 40.2 | 43.01 |
| HORVU5Hr1G087840.5 | Barley | nucleus, plastid | 20.61 | 42.77 |
| KRH72917 | Soybean | cytosol, nucleus, plasma membrane | 39.62 | 42.46 |
| KRH30885 | Soybean | cytosol, nucleus, vacuole | 40.35 | 41.37 |
| KRG98003 | Soybean | cytosol, nucleus, plasma membrane | 40.35 | 41.0 |
| AT5G17260.1 | Thale cress | nucleus | 28.16 | 40.76 |
| Bra039745.1-P | Field mustard | nucleus | 31.79 | 40.11 |
| HORVU0Hr1G000630.1 | Barley | nucleus | 15.38 | 39.85 |
| CDY16943 | Canola | nucleus | 28.59 | 39.64 |
| CDX78734 | Canola | cytosol | 28.01 | 39.39 |
| Bra006392.1-P | Field mustard | cytosol | 28.01 | 39.39 |
| CDX70745 | Canola | cytosol | 28.01 | 39.07 |
| AT1G65910.1 | Thale cress | nucleus | 35.27 | 38.51 |
| Bra021366.1-P | Field mustard | nucleus | 26.71 | 38.33 |
| CDY60870 | Canola | nucleus | 32.08 | 38.3 |
| CDY49932 | Canola | nucleus | 26.42 | 38.0 |
| AT3G03200.1 | Thale cress | nucleus | 26.27 | 37.79 |
| CDY43143 | Canola | nucleus | 26.12 | 37.66 |
| Bra032009.1-P | Field mustard | nucleus | 25.98 | 37.45 |
| CDY28745 | Canola | cytosol | 25.98 | 37.45 |
| CDY16427 | Canola | nucleus | 31.79 | 36.81 |
| Bra008567.1-P | Field mustard | nucleus | 23.08 | 35.57 |
| HORVU1Hr1G049840.3 | Barley | cytosol | 17.71 | 34.17 |
| CDY21216 | Canola | nucleus | 19.88 | 31.86 |
| HORVU2Hr1G045580.1 | Barley | nucleus | 15.97 | 31.43 |
| HORVU7Hr1G033990.1 | Barley | nucleus | 15.97 | 31.43 |
| HORVU1Hr1G065570.2 | Barley | nucleus | 17.56 | 28.07 |
| HORVU2Hr1G127550.1 | Barley | nucleus | 16.11 | 27.61 |
| HORVU2Hr1G127510.1 | Barley | nucleus | 16.11 | 27.61 |
| HORVU3Hr1G036380.1 | Barley | cytosol | 17.85 | 25.52 |
| Solyc02g081270.2.1 | Tomato | nucleus | 35.7 | 23.91 |
| HORVU7Hr1G060310.1 | Barley | nucleus | 19.88 | 21.21 |
| HORVU6Hr1G093050.4 | Barley | cytosol, golgi, nucleus | 18.29 | 19.66 |
| HORVU7Hr1G070780.5 | Barley | nucleus | 18.87 | 18.47 |
| HORVU5Hr1G074230.30 | Barley | nucleus, plastid | 15.97 | 14.51 |
| HORVU5Hr1G086730.1 | Barley | nucleus | 5.37 | 12.17 |
| HORVU5Hr1G086780.2 | Barley | cytosol, nucleus | 2.76 | 8.56 |
| HORVU0Hr1G021100.1 | Barley | cytosol, plastid | 4.93 | 5.98 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:A0A287PYF6 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:HORVU4Hr1G085320 | EnsemblPlants:HORVU4Hr1G085320.1 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf |
| PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF6 | SUPFAM:SSF101941 | UniParc:UPI000B482349 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:631514679..631519984
Molecular Weight (calculated)
75748.2 Da
IEP (calculated)
6.399
GRAVY (calculated)
-0.523
Length
689 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPVSLPPGF RFHPTDEELI IYYLKSKING RQIELEIIPE VDLYKCEPWD LPEKSFLPSK DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS
101: QKRAVGMKKT LVYYRGRAPH GSRTDWVMHE YRLDERECEI DNGLQDAYAL CRIFKKTAPG PKIMEHYGAA QYHGEQPQWT PSSVERSPTP CDGRGGGDDF
201: ESSSFSFPTE APMTSGSMHG GGGFGMQMMG GMPHPHEDGR WMQFLSEDAF NATNPYFMNP ASASNFSCLP SKVDVALECA RLQHRLALPP LEVEDFPHDV
301: SLDTKTGILQ SNTNEVDILQ EFLSVASASQ ELINGSGSSS SYPDMWLGAG TSSGGGHYMN ELSSLVDLGA AKAKEEVDNF YHMCGIGASM MRRDDEPGRL
401: VEISDMQEFK EGKKRVENLR GVKLLNNDLG EIVVEGDEAE GGIAHYPIQD TAENSGEAGH HMTDHTTDQG GIDTAPIFSQ SQPDDFALAI GFGNDDDANP
501: DASFDLYGKV DVQRGLFVSR VGAAKTFFHR VEPPNKVSFH LNPAASEVSK AIEKFHYLPV TSKVSASGSS SRVSVFGKVK ALIRGKFPTM RRPPSSSSLP
601: RHRRSETTVS ELLQIVSLLL APKGDVTERE ETARKKAKPG RWGCDGGCGS SWQLVGLPGK GSKGISSMFL SGKWAFLTSA LAAVPCNHL
101: QKRAVGMKKT LVYYRGRAPH GSRTDWVMHE YRLDERECEI DNGLQDAYAL CRIFKKTAPG PKIMEHYGAA QYHGEQPQWT PSSVERSPTP CDGRGGGDDF
201: ESSSFSFPTE APMTSGSMHG GGGFGMQMMG GMPHPHEDGR WMQFLSEDAF NATNPYFMNP ASASNFSCLP SKVDVALECA RLQHRLALPP LEVEDFPHDV
301: SLDTKTGILQ SNTNEVDILQ EFLSVASASQ ELINGSGSSS SYPDMWLGAG TSSGGGHYMN ELSSLVDLGA AKAKEEVDNF YHMCGIGASM MRRDDEPGRL
401: VEISDMQEFK EGKKRVENLR GVKLLNNDLG EIVVEGDEAE GGIAHYPIQD TAENSGEAGH HMTDHTTDQG GIDTAPIFSQ SQPDDFALAI GFGNDDDANP
501: DASFDLYGKV DVQRGLFVSR VGAAKTFFHR VEPPNKVSFH LNPAASEVSK AIEKFHYLPV TSKVSASGSS SRVSVFGKVK ALIRGKFPTM RRPPSSSSLP
601: RHRRSETTVS ELLQIVSLLL APKGDVTERE ETARKKAKPG RWGCDGGCGS SWQLVGLPGK GSKGISSMFL SGKWAFLTSA LAAVPCNHL
001: MAPVSMPPGF RFHPTDEELV IYYLKRKING RTIELEIIPE IDLYKCEPWD LPGKSLLPSK DLEWFFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVTS
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I
Arabidopsis Description
anac028NAC028 [Source:UniProtKB/TrEMBL;Acc:A0A178W7T7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.