CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH17271	Soybean	cytosol, nucleus, plasma membrane	92.07	91.93
PGSC0003DMT400018364	Potato	mitochondrion, nucleus	14.31	79.31
KRG98003	Soybean	cytosol, nucleus, plasma membrane	70.76	67.11
KRH30885	Soybean	cytosol, nucleus, vacuole	69.83	66.82
KRH34662	Soybean	cytosol	8.86	62.64
VIT_04s0079g00280.t01	Wine grape	cytosol, nucleus, plasma membrane	62.21	59.88
GSMUA_Achr1P02820_001	Banana	nucleus	32.19	55.65
GSMUA_Achr11P...	Banana	nucleus	32.5	54.57
PGSC0003DMT400055322	Potato	nucleus	45.88	52.49
Solyc02g036430.1.1	Tomato	nucleus	45.72	52.04
KRH09473	Soybean	nucleus	21.0	51.14
KRH38928	Soybean	nucleus	20.84	50.57
GSMUA_AchrUn_...	Banana	nucleus	27.68	50.14
KRH13792	Soybean	nucleus	26.59	49.28
KRH43662	Soybean	nucleus	26.44	48.85
Bra039745.1-P	Field mustard	nucleus	39.04	45.97
AT5G17260.1	Thale cress	nucleus	32.5	43.91
CDY60870	Canola	nucleus	39.04	43.5
CDY43143	Canola	nucleus	31.73	42.68
AT1G65910.1	Thale cress	nucleus	41.84	42.63
CDY28745	Canola	cytosol	31.57	42.47
Bra032009.1-P	Field mustard	nucleus	31.42	42.26
CDY16427	Canola	nucleus	39.04	42.18
Bra021366.1-P	Field mustard	nucleus	31.42	42.08
GSMUA_Achr8P13430_001	Banana	nucleus	39.66	42.01
CDY49932	Canola	nucleus	31.26	41.96
AT3G03200.1	Thale cress	nucleus	30.95	41.54
Os03t0119966-01	Rice	nucleus	41.68	41.23
CDX70745	Canola	cytosol	31.57	41.09
CDY16943	Canola	nucleus	31.73	41.05
Bra006392.1-P	Field mustard	cytosol	31.26	41.02
CDX78734	Canola	cytosol	31.26	41.02
EER95621	Sorghum	nucleus	43.23	40.76
TraesCS4B01G350600.1	Wheat	cytosol, nucleus, peroxisome	43.39	40.38
TraesCS4D01G345300.1	Wheat	cytosol, nucleus, peroxisome	43.55	40.11
KRH04320	Soybean	nucleus	21.31	40.06
TraesCS5A01G519300.1	Wheat	cytosol, nucleus, peroxisome	43.23	40.06
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	34.53	39.93
Zm00001d048493_P004	Maize	nucleus	42.61	39.88
KRH58218	Soybean	nucleus	21.31	39.71
HORVU4Hr1G085320.1	Barley	cytosol, nucleus, peroxisome	42.46	39.62
Zm00001d027395_P009	Maize	nucleus	40.75	39.46
Bra008567.1-P	Field mustard	nucleus	26.28	37.81
CDY21216	Canola	nucleus	24.42	36.51
KRH43549	Soybean	cytosol	16.02	31.89
KRH59567	Soybean	cytosol, golgi, nucleus	14.46	29.34
Solyc02g081270.2.1	Tomato	nucleus	44.79	27.99
KRH22653	Soybean	nucleus	14.93	25.88
KRG92124	Soybean	nucleus	18.04	24.95
KRH34660	Soybean	plastid	18.04	24.95
KRH72602	Soybean	nucleus	22.24	24.28
KRH16970	Soybean	nucleus	21.93	23.9
KRH64275	Soybean	nucleus	22.39	23.88
KRG91745	Soybean	nucleus	20.22	23.68
KRH53649	Soybean	nucleus	21.77	23.41
KRH64046	Soybean	nucleus	17.26	22.98
KRH35027	Soybean	nucleus	19.91	22.86
KRH53893	Soybean	nucleus	17.26	22.07
KRG92121	Soybean	cytosol	20.22	21.52
KRH26664	Soybean	nucleus	14.77	19.27

Protein Annotations

EntrezGene:100792628	MapMan:15.5.17	Gene3D:3.30.310.150	EMBL:ACUP02001254	ncoils:Coil	EnsemblPlantsGene:GLYMA_02G240500
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	UniProt:I1JHR8
InterPro:IPR003441	InterPro:IPR036093	EnsemblPlants:KRH72917	ProteinID:KRH72917	ProteinID:KRH72917.1	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF6	SUPFAM:SSF101941
TMHMM:TMhelix	UniParc:UPI000233783B	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:42900252..42904927

Molecular Weight (calculated)

73275.2 Da

IEP (calculated)

5.121

GRAVY (calculated)

-0.549

Length

643 amino acids

Sequence
(BLAST)

001: MAPVLPPGFR FHPTDEELVA YYLKRKINGR KIELEIIPEV DLYKCEPWDL PGKSLLPGKD LEWYFYSPRD RKYPNGSRTN RATKSGYWKA TGKDRKVNSQ
101: ARAVGMKKTL VYYRGRAPHG SRTNWVMHEY RLDERECETN SGLQDSYALC RVVKKTAVIP PKVGEHHYVN VPNANQITSD HSSSIEIYPE GRGEDLDSTN
201: YFMPVDACSP HNMGNETSLT INSGIMTRDH EKWSHFSSQD PLFSLPTSSF SKFGAIAYPP SKVDIALEYA RMQHRFVLPP LEVDDFPQVG ISELKMTQAS
301: GSMQGSRTET DILQEILSVA QVSQELINQS NYSQEWGGNN DNYAPREDDF TFMVGTNYNH SNHGMSSMRY ADKTWEDANT RTIEIGDVDE EFKAERMVEN
401: LRWVGMSSED LQKMEEQKIV PIEDISSFQT NEVQESEQHS NKEHNDDTEI NDFSLGFIND NDGPNENFIE DGNIDDYSSS PSFEVVEEIK VNHGMLVSTH
501: QVVETFFHQI VPSQTVQVHL INSVMAHNNH YVENAEAMLM IMENKGSSLR NKVKAYVMGK LIKPSKTIAS AIVFVFALVL MHCVYLKEEV EIWNESNNEV
601: NWFVGVKSHE KELSAVLKKI GIFLTISLAF CTMWASQNMV VNP

Best Arabidopsis Sequence Match ( AT1G65910.1 )
(BLAST)

001: MAPVSMPPGF RFHPTDEELV IYYLKRKING RTIELEIIPE IDLYKCEPWD LPGKSLLPSK DLEWFFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVTS
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I

Arabidopsis Description

anac028NAC028 [Source:UniProtKB/TrEMBL;Acc:A0A178W7T7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.