Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400018364 | Potato | mitochondrion, nucleus | 22.45 | 74.14 |
| GSMUA_Achr1P02820_001 | Banana | nucleus | 54.31 | 55.91 |
| GSMUA_Achr3P13880_001 | Banana | cytosol | 34.46 | 55.0 |
| GSMUA_Achr9P23940_001 | Banana | cytosol | 33.94 | 53.94 |
| GSMUA_AchrUn_... | Banana | nucleus | 49.35 | 53.24 |
| GSMUA_Achr11P... | Banana | cytosol | 22.72 | 46.03 |
| GSMUA_Achr6P03200_001 | Banana | cytosol | 25.33 | 45.54 |
| GSMUA_Achr8P13430_001 | Banana | nucleus | 71.54 | 45.14 |
| GSMUA_Achr10P... | Banana | nucleus | 28.2 | 42.02 |
| GSMUA_Achr3P18070_001 | Banana | nucleus | 25.33 | 39.11 |
| PGSC0003DMT400055322 | Potato | nucleus | 53.0 | 36.12 |
| Solyc02g036430.1.1 | Tomato | nucleus | 52.74 | 35.75 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 51.7 | 35.61 |
| Os03t0119966-01 | Rice | nucleus | 59.27 | 34.92 |
| AT5G17260.1 | Thale cress | nucleus | 43.34 | 34.87 |
| CDY16943 | Canola | nucleus | 44.13 | 34.0 |
| GSMUA_Achr2P11810_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 25.59 | 33.79 |
| Bra021366.1-P | Field mustard | nucleus | 42.3 | 33.75 |
| Zm00001d027395_P009 | Maize | nucleus | 58.49 | 33.73 |
| CDY49932 | Canola | nucleus | 42.04 | 33.61 |
| HORVU4Hr1G085320.1 | Barley | cytosol, nucleus, peroxisome | 60.31 | 33.53 |
| TraesCS4B01G350600.1 | Wheat | cytosol, nucleus, peroxisome | 60.31 | 33.43 |
| CDX70745 | Canola | cytosol | 43.08 | 33.4 |
| VIT_04s0079g00280.t01 | Wine grape | cytosol, nucleus, plasma membrane | 58.22 | 33.38 |
| EER95621 | Sorghum | nucleus | 59.27 | 33.28 |
| CDY28745 | Canola | cytosol | 41.51 | 33.26 |
| TraesCS5A01G519300.1 | Wheat | cytosol, nucleus, peroxisome | 60.05 | 33.14 |
| TraesCS4D01G345300.1 | Wheat | cytosol, nucleus, peroxisome | 60.31 | 33.09 |
| KRH17271 | Soybean | cytosol, nucleus, plasma membrane | 55.61 | 33.07 |
| Bra032009.1-P | Field mustard | nucleus | 41.25 | 33.05 |
| CDY43143 | Canola | nucleus | 41.25 | 33.05 |
| AT3G03200.1 | Thale cress | nucleus | 41.25 | 32.99 |
| Zm00001d048493_P004 | Maize | nucleus | 59.01 | 32.9 |
| Bra039745.1-P | Field mustard | nucleus | 46.74 | 32.78 |
| KRH72917 | Soybean | cytosol, nucleus, plasma membrane | 54.57 | 32.5 |
| Bra006392.1-P | Field mustard | cytosol | 41.51 | 32.45 |
| CDX78734 | Canola | cytosol | 41.51 | 32.45 |
| KRH30885 | Soybean | cytosol, nucleus, vacuole | 54.83 | 31.25 |
| GSMUA_Achr5P03360_001 | Banana | nucleus | 28.98 | 31.01 |
| CDY60870 | Canola | nucleus | 46.48 | 30.85 |
| KRG98003 | Soybean | cytosol, nucleus, plasma membrane | 54.05 | 30.53 |
| CDY16427 | Canola | nucleus | 46.74 | 30.08 |
| GSMUA_Achr5P18140_001 | Banana | nucleus | 28.98 | 29.68 |
| Bra008567.1-P | Field mustard | nucleus | 34.46 | 29.53 |
| AT1G65910.1 | Thale cress | nucleus | 47.52 | 28.84 |
| CDY21216 | Canola | nucleus | 30.55 | 27.21 |
| GSMUA_Achr11P... | Banana | nucleus | 27.94 | 27.02 |
| GSMUA_Achr7P23330_001 | Banana | nucleus | 26.89 | 25.25 |
| GSMUA_Achr11P... | Banana | nucleus | 27.15 | 23.74 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.33 | 21.09 |
| GSMUA_Achr4P29170_001 | Banana | nucleus | 30.29 | 20.17 |
| GSMUA_AchrUn_... | Banana | nucleus | 24.8 | 19.87 |
| GSMUA_Achr8P24280_001 | Banana | nucleus | 30.29 | 19.76 |
| GSMUA_Achr1P03560_001 | Banana | nucleus | 28.98 | 19.34 |
| GSMUA_Achr5P23620_001 | Banana | nucleus | 26.11 | 18.76 |
| Solyc02g081270.2.1 | Tomato | nucleus | 49.09 | 18.27 |
| GSMUA_Achr9P23580_001 | Banana | plastid | 27.15 | 17.54 |
| GSMUA_Achr9P20400_001 | Banana | nucleus, peroxisome, plastid | 25.33 | 16.17 |
| GSMUA_Achr2P04010_001 | Banana | plastid | 26.63 | 15.91 |
| GSMUA_AchrUn_... | Banana | extracellular, plasma membrane | 29.5 | 14.89 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSMUA_Achr11G01400_001 | EnsemblPlants:GSMUA_Achr11P01400_001 | EnsemblPlants:GSMUA_Achr11T01400_001 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M0RNH0 |
| InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF6 |
| SUPFAM:SSF101941 | UniParc:UPI0002956A0B | SEG:seg | : | : | : |
Description
no apical meristem protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G01400_001]
Coordinates
chr11:-:957431..959732
Molecular Weight (calculated)
43375.7 Da
IEP (calculated)
4.967
GRAVY (calculated)
-0.617
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MASMSLPPGF RFHPTDEELV AYYLKRKING REIELEIIPE VDLYKCEPWD LPDLEWYFFS PRDRKYPNGS RTNRATRAGY WKATGKDRRV SSQRRAVGMK
101: KTLVYYRGRA PHGSRTDWVM HEYRLDENEC ENASAGLQDA YALCRVFKKT APGIKHSGLP ADRSPTVDVS SEGRVDDLES CGVPFPNDVW SSEMVHGQGA
201: FLGASTPVDG RWMQYLTEEE EAYSPGSFSY MPSKVDVALQ CARLQHRLSL PPLEVEDFSQ INLTESKILH SGNYGDTGNQ VDIIQEILSV ASASQELINN
301: SGCHDMWVGA NPHGEEEFAS FFELDKGSDG IQFPQTSFMS SLRSIAKSSN VGELPTKLFE ISDLEEEFKE EEKRVEHLRG VYR
101: KTLVYYRGRA PHGSRTDWVM HEYRLDENEC ENASAGLQDA YALCRVFKKT APGIKHSGLP ADRSPTVDVS SEGRVDDLES CGVPFPNDVW SSEMVHGQGA
201: FLGASTPVDG RWMQYLTEEE EAYSPGSFSY MPSKVDVALQ CARLQHRLSL PPLEVEDFSQ INLTESKILH SGNYGDTGNQ VDIIQEILSV ASASQELINN
301: SGCHDMWVGA NPHGEEEFAS FFELDKGSDG IQFPQTSFMS SLRSIAKSSN VGELPTKLFE ISDLEEEFKE EEKRVEHLRG VYR
001: MAPVSMPPGF RFHPTDEELV IYYLKRKING RTIELEIIPE IDLYKCEPWD LPGKSLLPSK DLEWFFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVTS
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I
Arabidopsis Description
anac028NAC028 [Source:UniProtKB/TrEMBL;Acc:A0A178W7T7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.