Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43143 | Canola | nucleus | 95.82 | 95.82 |
| CDY49932 | Canola | nucleus | 86.82 | 86.64 |
| AT3G03200.1 | Thale cress | nucleus | 85.56 | 85.39 |
| CDY21216 | Canola | nucleus | 76.36 | 84.88 |
| PGSC0003DMT400018364 | Potato | mitochondrion, nucleus | 17.36 | 71.55 |
| CDX70745 | Canola | cytosol | 64.64 | 62.55 |
| CDX78734 | Canola | cytosol | 63.18 | 61.63 |
| CDY16943 | Canola | nucleus | 63.6 | 61.17 |
| CDY71253 | Canola | cytosol | 21.76 | 58.43 |
| CDX92153 | Canola | nucleus | 26.57 | 56.19 |
| CDX95832 | Canola | nucleus | 26.57 | 56.19 |
| CDY70627 | Canola | cytosol | 19.04 | 55.15 |
| CDY41351 | Canola | plastid | 17.99 | 51.5 |
| CDX69392 | Canola | nucleus | 40.38 | 45.09 |
| GSMUA_Achr1P02820_001 | Banana | nucleus | 33.26 | 42.74 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.59 | 42.54 |
| CDY10502 | Canola | nucleus | 26.99 | 42.02 |
| CDY42413 | Canola | nucleus | 26.99 | 41.75 |
| GSMUA_Achr11P... | Banana | nucleus | 33.26 | 41.51 |
| CDX67739 | Canola | nucleus | 26.78 | 41.16 |
| CDX90431 | Canola | nucleus | 23.01 | 38.46 |
| CDY01508 | Canola | nucleus | 22.8 | 38.11 |
| CDX77674 | Canola | nucleus | 22.59 | 38.03 |
| CDX78816 | Canola | nucleus | 22.8 | 37.33 |
| CDY44498 | Canola | nucleus | 22.8 | 37.33 |
| CDY63046 | Canola | nucleus | 22.59 | 37.24 |
| CDY59580 | Canola | nucleus | 22.8 | 37.07 |
| CDX87703 | Canola | nucleus | 22.59 | 36.73 |
| CDX84070 | Canola | nucleus | 21.55 | 36.4 |
| CDY66060 | Canola | nucleus | 21.55 | 36.01 |
| CDY67205 | Canola | nucleus | 21.55 | 36.01 |
| PGSC0003DMT400055322 | Potato | nucleus | 41.63 | 35.41 |
| Solyc02g036430.1.1 | Tomato | nucleus | 41.21 | 34.87 |
| CDY60870 | Canola | nucleus | 39.33 | 32.58 |
| VIT_04s0079g00280.t01 | Wine grape | cytosol, nucleus, plasma membrane | 45.19 | 32.34 |
| KRH30885 | Soybean | cytosol, nucleus, vacuole | 45.4 | 32.29 |
| KRH17271 | Soybean | cytosol, nucleus, plasma membrane | 43.31 | 32.14 |
| KRG98003 | Soybean | cytosol, nucleus, plasma membrane | 45.4 | 32.01 |
| CDY16427 | Canola | nucleus | 39.33 | 31.6 |
| KRH72917 | Soybean | cytosol, nucleus, plasma membrane | 42.47 | 31.57 |
| CDY46459 | Canola | nucleus | 19.87 | 31.25 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 35.15 | 30.22 |
| GSMUA_Achr8P13430_001 | Banana | nucleus | 37.45 | 29.49 |
| CDY44793 | Canola | nucleus | 21.13 | 28.86 |
| CDX86970 | Canola | nucleus | 19.04 | 28.8 |
| CDY43785 | Canola | nucleus | 20.5 | 28.49 |
| CDX84485 | Canola | nucleus | 20.5 | 28.32 |
| Os03t0119966-01 | Rice | nucleus | 38.49 | 28.31 |
| CDX81124 | Canola | nucleus | 20.08 | 28.07 |
| Zm00001d027395_P009 | Maize | nucleus | 38.28 | 27.56 |
| EER95621 | Sorghum | nucleus | 38.7 | 27.13 |
| CDX71459 | Canola | cytosol, golgi, nucleus | 19.25 | 26.67 |
| CDY04487 | Canola | cytosol | 19.25 | 26.67 |
| CDX70995 | Canola | cytosol | 18.62 | 26.65 |
| CDY41352 | Canola | nucleus | 23.43 | 26.6 |
| Zm00001d048493_P004 | Maize | nucleus | 38.08 | 26.49 |
| CDX92368 | Canola | cytosol | 18.41 | 26.27 |
| CDY35676 | Canola | cytoskeleton, cytosol, nucleus | 18.83 | 26.24 |
| CDX88803 | Canola | cytosol | 18.41 | 26.11 |
| CDY34714 | Canola | cytosol, golgi, nucleus | 18.41 | 26.04 |
| HORVU4Hr1G085320.1 | Barley | cytosol, nucleus, peroxisome | 37.45 | 25.98 |
| CDY20351 | Canola | cytosol, golgi, nucleus | 18.41 | 25.96 |
| TraesCS4B01G350600.1 | Wheat | cytosol, nucleus, peroxisome | 37.45 | 25.9 |
| TraesCS5A01G519300.1 | Wheat | cytosol, nucleus, peroxisome | 37.45 | 25.79 |
| TraesCS4D01G345300.1 | Wheat | cytosol, nucleus, peroxisome | 37.66 | 25.79 |
| CDY09128 | Canola | cytosol | 18.41 | 25.66 |
| CDY41353 | Canola | nucleus | 23.43 | 25.4 |
| CDY00946 | Canola | nucleus | 23.64 | 25.06 |
| CDY08601 | Canola | nucleus, plastid | 23.64 | 24.84 |
| CDY00676 | Canola | nucleus | 22.18 | 24.77 |
| CDY21575 | Canola | nucleus | 21.55 | 23.73 |
| CDX69911 | Canola | nucleus | 21.55 | 23.52 |
| CDY00677 | Canola | nucleus | 21.34 | 22.92 |
| CDX73920 | Canola | nucleus | 21.34 | 22.82 |
| CDX73921 | Canola | cytosol, nucleus, plastid | 21.76 | 22.81 |
| CDY00208 | Canola | nucleus | 20.5 | 22.69 |
| CDX88115 | Canola | cytosol | 20.71 | 22.35 |
| CDX78356 | Canola | nucleus | 16.95 | 22.31 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 23.85 | 21.97 |
| CDX80455 | Canola | nucleus | 20.92 | 21.93 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 23.64 | 21.9 |
| CDY25752 | Canola | nucleus | 23.22 | 21.81 |
| CDY19828 | Canola | nucleus | 20.29 | 21.8 |
| CDX70227 | Canola | cytosol, nucleus, vacuole | 24.69 | 21.3 |
| CDY44853 | Canola | cytosol, nucleus, vacuole | 24.9 | 21.25 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 24.69 | 21.22 |
| CDY28401 | Canola | cytosol, nucleus, plastid | 24.06 | 21.06 |
| CDY70628 | Canola | golgi | 17.36 | 20.96 |
| CDX73305 | Canola | nucleus | 22.8 | 20.92 |
| CDY11289 | Canola | cytosol, nucleus, vacuole | 24.69 | 20.85 |
| CDX93723 | Canola | nucleus | 24.06 | 20.68 |
| CDY41354 | Canola | cytosol, nucleus, plastid | 23.22 | 20.67 |
| CDY34716 | Canola | nucleus | 12.55 | 20.41 |
| CDY12515 | Canola | plastid | 23.01 | 20.18 |
| CDY05939 | Canola | nucleus | 19.46 | 20.09 |
| CDY48632 | Canola | cytosol, nucleus, plastid | 23.64 | 20.07 |
| CDY08139 | Canola | nucleus | 19.46 | 20.04 |
| CDX91785 | Canola | nucleus | 22.38 | 19.85 |
| CDY28397 | Canola | nucleus | 23.43 | 19.38 |
| Solyc02g081270.2.1 | Tomato | nucleus | 41.0 | 19.05 |
| CDX73304 | Canola | nucleus | 23.01 | 18.87 |
| CDY66161 | Canola | nucleus | 22.8 | 17.17 |
| CDY26922 | Canola | nucleus | 22.8 | 17.14 |
| CDX87118 | Canola | nucleus | 19.87 | 11.42 |
| CDX86969 | Canola | cytosol | 1.67 | 7.48 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078GQC3 | UniProt:A0A078GQC3 | EnsemblPlants:CDY28745 | ProteinID:CDY28745 |
| ProteinID:CDY28745.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00041385001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF6 | SUPFAM:SSF101941 | UniParc:UPI0004EDFD97 | SEG:seg | : | : |
Description
BnaCnng06310DBnaCnng06310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GQC3]
Coordinates
chrLK032225:-:511855..514297
Molecular Weight (calculated)
55386.5 Da
IEP (calculated)
5.140
GRAVY (calculated)
-0.663
Length
478 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPVSLPPGF RFHPTDEELI TYYLKRKING LEIELEVIAE VDLYKCEPWD LPGKSLLPSK DQEWYFFSPR DRKYPNGSRT NRATKGGYWK ATGKDRRVSW
101: RDRSIGTKKT LVYYRGRAPH GIRTGWVMHE YRLDENECEP SAYGMQDAYA LCRVFKKIVI EAKPRDQHRS YIHAMSNVSG NSSFDPCSDL EICSTTHQVQ
201: NAFQPQIGNG RFNSNASNEN WSQYYGSSYP PFPTPYKVNN EIECSMLQHN ISLPPLRIEN SAVSNYDFYN TSTTHNNDHG VLEDFTFAAS NSNHYNNTVG
301: DHVIHVGNYD EPLIMSNNYT NQGYIEEQKI ILTLDDNDQD LGFHGDNTNI NIDIDDFFSF DMYNEENVIR VKGNEEDVNI NEAVDSSGFE VVEEEIRVNN
401: QMLISTYQTT KILYHQVVPS HTLKVQINLI NHNVEERILF IEEDNDSWVQ RAEKITKIKL NLVSLIAQQY YKYLTIFF
101: RDRSIGTKKT LVYYRGRAPH GIRTGWVMHE YRLDENECEP SAYGMQDAYA LCRVFKKIVI EAKPRDQHRS YIHAMSNVSG NSSFDPCSDL EICSTTHQVQ
201: NAFQPQIGNG RFNSNASNEN WSQYYGSSYP PFPTPYKVNN EIECSMLQHN ISLPPLRIEN SAVSNYDFYN TSTTHNNDHG VLEDFTFAAS NSNHYNNTVG
301: DHVIHVGNYD EPLIMSNNYT NQGYIEEQKI ILTLDDNDQD LGFHGDNTNI NIDIDDFFSF DMYNEENVIR VKGNEEDVNI NEAVDSSGFE VVEEEIRVNN
401: QMLISTYQTT KILYHQVVPS HTLKVQINLI NHNVEERILF IEEDNDSWVQ RAEKITKIKL NLVSLIAQQY YKYLTIFF
001: MAPVSLPPGF RFHPTDEELI TYYLKRKING LEIELEVIAE VDLYKCEPWD LPGKSLLPSK DQEWYFFSPR DRKYPNGSRT NRATKGGYWK ATGKDRRVSW
101: RDRAIGTKKT LVYYRGRAPH GIRTGWVMHE YRLDETECEP SAYGMQDAYA LCRVFKKIVI EAKPRDQHRS YVHAMSNVSG NCSSSFDTCS DLEISSTTHQ
201: VQNTFQPRFG NERFNSNAIS NEDWSQYYGS SYRPFPTPYK VNTEIECSML QHNIYLPPLR VENSAFSDSD FFTSMTHNND HGVFDDFTFA ASNSNHNNSV
301: GDQVIHVGNY DEQLITSNRH MNQTGYIKEQ KIRSSLDNTD EDPGFHGNNT NDNIDIDDFL SFDIYNEDNV NQIEDNEDVN TNETLDSSGF EVVEEETRFN
401: NQMLISTYQT TKILYHQVVP CHTLKVHVNP ISHNVEERTL FIEEDKDSWL QRAEKITKTK LTLFSLMAQQ YYKCLAIFF
101: RDRAIGTKKT LVYYRGRAPH GIRTGWVMHE YRLDETECEP SAYGMQDAYA LCRVFKKIVI EAKPRDQHRS YVHAMSNVSG NCSSSFDTCS DLEISSTTHQ
201: VQNTFQPRFG NERFNSNAIS NEDWSQYYGS SYRPFPTPYK VNTEIECSML QHNIYLPPLR VENSAFSDSD FFTSMTHNND HGVFDDFTFA ASNSNHNNSV
301: GDQVIHVGNY DEQLITSNRH MNQTGYIKEQ KIRSSLDNTD EDPGFHGNNT NDNIDIDDFL SFDIYNEDNV NQIEDNEDVN TNETLDSSGF EVVEEETRFN
401: NQMLISTYQT TKILYHQVVP CHTLKVHVNP ISHNVEERTL FIEEDKDSWL QRAEKITKTK LTLFSLMAQQ YYKCLAIFF
Arabidopsis Description
NAC045NAC045 [Source:UniProtKB/TrEMBL;Acc:A0A178VIZ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.