Subcellular Localization
min:
: max
Winner_takes_all: vacuole, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- vacuole 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005804.1-P | Field mustard | cytosol, nucleus, vacuole | 99.65 | 99.47 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 92.4 | 94.06 |
| CDY70627 | Canola | cytosol | 24.03 | 82.42 |
| CDX70227 | Canola | cytosol, nucleus, vacuole | 80.39 | 82.13 |
| CDY44853 | Canola | cytosol, nucleus, vacuole | 80.21 | 81.07 |
| AT5G04410.1 | Thale cress | cytosol, nucleus, plastid | 79.33 | 79.19 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 72.26 | 78.81 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 71.38 | 78.29 |
| KRH34662 | Soybean | cytosol | 10.6 | 65.93 |
| CDY41354 | Canola | cytosol, nucleus, plastid | 58.13 | 61.27 |
| CDY41351 | Canola | plastid | 17.84 | 60.48 |
| CDY71253 | Canola | cytosol | 15.72 | 50.0 |
| VIT_13s0019g05240.t01 | Wine grape | cytosol, nucleus, plastid | 46.47 | 47.05 |
| CDX95832 | Canola | nucleus | 18.02 | 45.13 |
| CDX92153 | Canola | nucleus | 17.84 | 44.69 |
| Solyc05g055470.2.1 | Tomato | nucleus | 42.76 | 44.49 |
| Solyc11g008000.1.1 | Tomato | nucleus | 40.81 | 43.75 |
| PGSC0003DMT400060090 | Potato | nucleus | 40.99 | 43.36 |
| PGSC0003DMT400079789 | Potato | cytosol, nucleus, plastid | 41.52 | 43.28 |
| CDX81124 | Canola | nucleus | 22.79 | 37.72 |
| CDX77674 | Canola | nucleus | 18.55 | 36.97 |
| CDY63046 | Canola | nucleus | 18.73 | 36.55 |
| CDY10502 | Canola | nucleus | 19.79 | 36.48 |
| CDY44793 | Canola | nucleus | 22.26 | 36.0 |
| CDY42413 | Canola | nucleus | 19.61 | 35.92 |
| CDX84485 | Canola | nucleus | 21.55 | 35.26 |
| CDY43785 | Canola | nucleus | 21.38 | 35.17 |
| CDX67739 | Canola | nucleus | 19.26 | 35.05 |
| CDY46459 | Canola | nucleus | 18.73 | 34.87 |
| CDY59580 | Canola | nucleus | 18.02 | 34.69 |
| CDX90431 | Canola | nucleus | 17.49 | 34.62 |
| CDY01508 | Canola | nucleus | 17.49 | 34.62 |
| CDX87703 | Canola | nucleus | 17.84 | 34.35 |
| CDY44498 | Canola | nucleus | 17.49 | 33.9 |
| CDY41353 | Canola | nucleus | 26.33 | 33.79 |
| CDX78816 | Canola | nucleus | 17.31 | 33.56 |
| CDX84070 | Canola | nucleus | 16.61 | 33.22 |
| CDY00676 | Canola | nucleus | 25.09 | 33.18 |
| CDY41352 | Canola | nucleus | 24.56 | 33.02 |
| KRG92121 | Soybean | cytosol | 35.16 | 32.95 |
| CDY66060 | Canola | nucleus | 16.61 | 32.87 |
| CDY67205 | Canola | nucleus | 16.61 | 32.87 |
| CDY00946 | Canola | nucleus | 25.09 | 31.49 |
| CDY08601 | Canola | nucleus, plastid | 25.09 | 31.21 |
| CDX73921 | Canola | cytosol, nucleus, plastid | 24.91 | 30.92 |
| CDX78356 | Canola | nucleus | 19.43 | 30.3 |
| CDX86970 | Canola | nucleus | 16.78 | 30.06 |
| CDX69911 | Canola | nucleus | 23.14 | 29.91 |
| CDY21575 | Canola | nucleus | 22.79 | 29.72 |
| CDY00677 | Canola | nucleus | 23.32 | 29.66 |
| CDX73920 | Canola | nucleus | 23.32 | 29.53 |
| CDY70628 | Canola | golgi | 20.14 | 28.79 |
| TraesCS6D01G390200.1 | Wheat | cytosol, nucleus, peroxisome | 31.8 | 28.04 |
| TraesCS6A01G406700.1 | Wheat | cytosol, golgi, nucleus | 31.8 | 27.95 |
| HORVU6Hr1G093050.4 | Barley | cytosol, golgi, nucleus | 31.27 | 27.61 |
| Zm00001d049913_P001 | Maize | plastid | 31.1 | 27.59 |
| EES06041 | Sorghum | nucleus | 31.45 | 27.3 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.79 | 26.99 |
| Os08t0562200-02 | Rice | nucleus | 31.27 | 26.98 |
| Os02t0822400-01 | Rice | nucleus | 30.04 | 26.9 |
| CDY09128 | Canola | cytosol | 16.25 | 26.82 |
| TraesCS7B01G196900.1 | Wheat | nucleus | 30.39 | 26.75 |
| OQU80699 | Sorghum | plastid | 31.63 | 26.72 |
| TraesCS7D01G283800.1 | Wheat | nucleus | 30.39 | 26.63 |
| CDY35676 | Canola | cytoskeleton, cytosol, nucleus | 16.08 | 26.53 |
| CDX88803 | Canola | cytosol | 15.72 | 26.41 |
| CDX70995 | Canola | cytosol | 15.55 | 26.35 |
| Zm00001d031898_P001 | Maize | plastid | 31.1 | 26.35 |
| HORVU7Hr1G060310.1 | Barley | nucleus | 30.04 | 26.32 |
| CDY04487 | Canola | cytosol | 15.9 | 26.09 |
| Zm00001d051879_P001 | Maize | nucleus | 30.04 | 25.88 |
| GSMUA_Achr9P20400_001 | Banana | nucleus, peroxisome, plastid | 27.39 | 25.83 |
| CDX71459 | Canola | cytosol, golgi, nucleus | 15.72 | 25.8 |
| CDY34714 | Canola | cytosol, golgi, nucleus | 15.37 | 25.74 |
| CDX92368 | Canola | cytosol | 15.19 | 25.67 |
| CDY20351 | Canola | cytosol, golgi, nucleus | 15.37 | 25.66 |
| CDY25752 | Canola | nucleus | 22.79 | 25.34 |
| GSMUA_Achr9P23580_001 | Banana | plastid | 26.33 | 25.13 |
| CDX70745 | Canola | cytosol | 21.91 | 25.1 |
| CDY43143 | Canola | nucleus | 21.02 | 24.9 |
| CDY28745 | Canola | cytosol | 20.85 | 24.69 |
| CDY49932 | Canola | nucleus | 20.85 | 24.63 |
| CDY16943 | Canola | nucleus | 21.55 | 24.55 |
| TraesCSU01G135000.1 | Wheat | nucleus | 30.39 | 24.26 |
| CDX78734 | Canola | cytosol | 20.85 | 24.08 |
| CDX73305 | Canola | nucleus | 22.08 | 23.99 |
| GSMUA_Achr2P04010_001 | Banana | plastid | 26.86 | 23.71 |
| CDY12515 | Canola | plastid | 22.79 | 23.67 |
| TraesCS6B01G451300.1 | Wheat | nucleus | 26.68 | 23.56 |
| CDY00208 | Canola | nucleus | 17.84 | 23.38 |
| CDX93723 | Canola | nucleus | 22.61 | 23.02 |
| CDY05939 | Canola | nucleus | 18.55 | 22.68 |
| CDX91785 | Canola | nucleus | 21.55 | 22.63 |
| CDY28401 | Canola | cytosol, nucleus, plastid | 21.55 | 22.34 |
| CDY48632 | Canola | cytosol, nucleus, plastid | 22.08 | 22.2 |
| CDX88115 | Canola | cytosol | 17.31 | 22.12 |
| CDY34716 | Canola | nucleus | 11.48 | 22.11 |
| CDY19828 | Canola | nucleus | 17.31 | 22.02 |
| CDY60870 | Canola | nucleus | 22.26 | 21.84 |
| CDY28397 | Canola | nucleus | 22.26 | 21.8 |
| CDY08139 | Canola | nucleus | 17.84 | 21.77 |
| CDX73304 | Canola | nucleus | 22.26 | 21.61 |
| CDX80455 | Canola | nucleus | 17.31 | 21.49 |
| CDY16427 | Canola | nucleus | 22.44 | 21.34 |
| CDY21216 | Canola | nucleus | 15.19 | 20.0 |
| CDY66161 | Canola | nucleus | 19.61 | 17.48 |
| CDY26922 | Canola | nucleus | 19.61 | 17.45 |
| CDX69392 | Canola | nucleus | 9.01 | 11.92 |
| CDX87118 | Canola | nucleus | 16.96 | 11.54 |
| CDX86969 | Canola | cytosol | 1.24 | 6.54 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078FEB6 | UniProt:A0A078FEB6 | EnsemblPlants:CDY11289 | ProteinID:CDY11289 |
| ProteinID:CDY11289.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| EnsemblPlantsGene:GSBRNA2T00049322001 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 |
| PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF43 | SUPFAM:SSF101941 | TMHMM:TMhelix | UniParc:UPI0004EF4578 |
| SEG:seg | : | : | : | : | : |
Description
BnaA03g01250DBnaA03g01250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FEB6]
Coordinates
chrLK032010:+:588890..591513
Molecular Weight (calculated)
62819.6 Da
IEP (calculated)
4.308
GRAVY (calculated)
-0.616
Length
566 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGSATSLA PGFRFHPTDE ELVRYYLKRK VCNKPFKLDA ISVTDVYKSE PWDLPDKSKL KSRDLEWYFF SMLDKKYNNG SKTNRATEKG YWKTTGKDRE
101: IRNGSRAVGM KKTLVYHKGR APRGERTNWV MHEYRLTDEE LKRTGAPQDA FVLCRIFQKS GTGPKNGEQY GAPYLEEEWE EDKMTFVPEQ EALSEGLGFD
201: DDVYLGIDEF EEKPDNLVVY DAIPVDPNYF HGESSNNVES GNYSDSGNFI QPGNFAVDSG GCFGQTIETF GEDQKPIIRD GSIQPCSLFP NEQNVCGVHD
301: ENAVNLETSN SNVFAAENCY SDIPIDDTNY MPDESFIDPS NNLPLTDGLY LEGNDLGNAL PDDFDFEDYL DFFGDEDGQN LTLDVSQLLG SEDALPEQEG
401: GLEQIPSSGD LEKEVAQGKE AVEKDESGEG STSKHDADVT DFDSASKYPF LKKASQMCGA TSSFASQFQT KDRLHAGQSS GSVHVTAGII RISNMNLAAD
501: MGWSYDKNNN LNVVLSFGSV QRDDGMSSSV NKTGGVPATR AMLIFLCLWI LLLSVSFKIG TMVSAR
101: IRNGSRAVGM KKTLVYHKGR APRGERTNWV MHEYRLTDEE LKRTGAPQDA FVLCRIFQKS GTGPKNGEQY GAPYLEEEWE EDKMTFVPEQ EALSEGLGFD
201: DDVYLGIDEF EEKPDNLVVY DAIPVDPNYF HGESSNNVES GNYSDSGNFI QPGNFAVDSG GCFGQTIETF GEDQKPIIRD GSIQPCSLFP NEQNVCGVHD
301: ENAVNLETSN SNVFAAENCY SDIPIDDTNY MPDESFIDPS NNLPLTDGLY LEGNDLGNAL PDDFDFEDYL DFFGDEDGQN LTLDVSQLLG SEDALPEQEG
401: GLEQIPSSGD LEKEVAQGKE AVEKDESGEG STSKHDADVT DFDSASKYPF LKKASQMCGA TSSFASQFQT KDRLHAGQSS GSVHVTAGII RISNMNLAAD
501: MGWSYDKNNN LNVVLSFGSV QRDDGMSSSV NKTGGVPATR AMLIFLCLWI LLLSVSFKIG TMVSAR
001: MGRGSVTSLA PGFRFHPTDE ELVRYYLKRK VCNKPFKFDA ISVTDIYKSE PWDLPDKSKL KSRDLEWYFF SMLDKKYSNG SKTNRATEKG YWKTTGKDRE
101: IRNGSRVVGM KKTLVYHKGR APRGERTNWV MHEYRLSDED LKKAGVPQEA YVLCRIFQKS GTGPKNGEQY GAPYLEEEWE EDGMTYVPAQ DAFSEGLALN
201: DDVYVDIDDI DEKPENLVVY DAVPILPNYC HGESSNNVES GNYSDSGNYI QPGNNVVDSG GYFEQPIETF EEDRKPIIRE GSIQPCSLFP EEQIGCGVQD
301: ENVVNLESSN NNVFVADTCY SDIPIDHNYL PDEPFMDPNN NLPLNDGLYL ETNDLSCAQQ DDFNFEDYLS FFDDEGLTFD DSLLMGPEDF LPNQEALDQK
401: PAPKELEKEV AGGKEAVEEK ESGEGSSSKQ DTDFKDFDSA PKYPFLKKTS HMLGAIPTPS SFASQFQTKD AMRLHAAQSS GSVHVTAGMM RISNMTLAAD
501: SGMGWSYDKN GNLNVVLSFG VVQQDDAMTA SGSKTGITAT RAMLVFMCLW VLLLSVSFKI VTMVSAR
101: IRNGSRVVGM KKTLVYHKGR APRGERTNWV MHEYRLSDED LKKAGVPQEA YVLCRIFQKS GTGPKNGEQY GAPYLEEEWE EDGMTYVPAQ DAFSEGLALN
201: DDVYVDIDDI DEKPENLVVY DAVPILPNYC HGESSNNVES GNYSDSGNYI QPGNNVVDSG GYFEQPIETF EEDRKPIIRE GSIQPCSLFP EEQIGCGVQD
301: ENVVNLESSN NNVFVADTCY SDIPIDHNYL PDEPFMDPNN NLPLNDGLYL ETNDLSCAQQ DDFNFEDYLS FFDDEGLTFD DSLLMGPEDF LPNQEALDQK
401: PAPKELEKEV AGGKEAVEEK ESGEGSSSKQ DTDFKDFDSA PKYPFLKKTS HMLGAIPTPS SFASQFQTKD AMRLHAAQSS GSVHVTAGMM RISNMTLAAD
501: SGMGWSYDKN GNLNVVLSFG VVQQDDAMTA SGSKTGITAT RAMLVFMCLW VLLLSVSFKI VTMVSAR
Arabidopsis Description
NAC078NAC domain-containing protein 78 [Source:UniProtKB/Swiss-Prot;Acc:Q84K00]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.