Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034436.1-P | Field mustard | cytosol, nucleus, plastid | 99.45 | 99.45 |
| CDX73305 | Canola | nucleus | 85.71 | 89.83 |
| CDY48632 | Canola | cytosol, nucleus, plastid | 77.11 | 74.78 |
| CDX93723 | Canola | nucleus | 74.91 | 73.56 |
| CDX91785 | Canola | nucleus | 71.25 | 72.17 |
| CDY46459 | Canola | nucleus | 39.38 | 70.72 |
| AT1G34190.1 | Thale cress | nucleus | 69.6 | 68.22 |
| CDY28397 | Canola | nucleus | 65.57 | 61.94 |
| CDX73304 | Canola | nucleus | 64.29 | 60.21 |
| CDY70627 | Canola | cytosol | 15.75 | 52.12 |
| CDY41351 | Canola | plastid | 13.92 | 45.51 |
| CDY71253 | Canola | cytosol | 13.55 | 41.57 |
| VIT_18s0001g01820.t01 | Wine grape | nucleus | 42.86 | 40.91 |
| CDX95832 | Canola | nucleus | 15.75 | 38.05 |
| CDX92153 | Canola | nucleus | 15.75 | 38.05 |
| Solyc12g056790.1.1 | Tomato | nucleus | 41.03 | 37.97 |
| CDY25752 | Canola | nucleus | 35.35 | 37.92 |
| PGSC0003DMT400043681 | Potato | nucleus | 40.66 | 37.88 |
| Solyc04g072220.2.1 | Tomato | cytosol, nucleus, plastid | 40.48 | 36.89 |
| CDY12515 | Canola | plastid | 36.08 | 36.15 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.6 | 31.28 |
| CDY10502 | Canola | nucleus | 17.22 | 30.62 |
| CDY42413 | Canola | nucleus | 17.03 | 30.1 |
| CDX77674 | Canola | nucleus | 15.57 | 29.93 |
| CDX67739 | Canola | nucleus | 17.03 | 29.9 |
| CDX81124 | Canola | nucleus | 18.68 | 29.82 |
| CDY44793 | Canola | nucleus | 19.05 | 29.71 |
| CDY63046 | Canola | nucleus | 15.75 | 29.66 |
| CDY43785 | Canola | nucleus | 18.68 | 29.65 |
| GSMUA_Achr8P24280_001 | Banana | nucleus | 31.87 | 29.64 |
| CDX84485 | Canola | nucleus | 18.68 | 29.48 |
| CDY66060 | Canola | nucleus | 15.2 | 29.02 |
| CDY01508 | Canola | nucleus | 15.2 | 29.02 |
| CDY67205 | Canola | nucleus | 15.2 | 29.02 |
| CDX90431 | Canola | nucleus | 15.2 | 29.02 |
| CDY59580 | Canola | nucleus | 15.57 | 28.91 |
| CDY44498 | Canola | nucleus | 15.38 | 28.77 |
| CDX84070 | Canola | nucleus | 14.84 | 28.62 |
| CDX87703 | Canola | nucleus | 15.38 | 28.57 |
| CDX78816 | Canola | nucleus | 15.2 | 28.42 |
| CDX86970 | Canola | nucleus | 15.57 | 26.9 |
| CDY41352 | Canola | nucleus | 19.96 | 25.89 |
| CDY00676 | Canola | nucleus | 19.96 | 25.47 |
| CDX88803 | Canola | cytosol | 15.57 | 25.22 |
| CDX71459 | Canola | cytosol, golgi, nucleus | 15.93 | 25.22 |
| CDY04487 | Canola | cytosol | 15.93 | 25.22 |
| PGSC0003DMT400079995 | Potato | nucleus | 41.58 | 25.19 |
| CDY00946 | Canola | nucleus | 20.7 | 25.06 |
| CDY41353 | Canola | nucleus | 20.15 | 24.94 |
| CDX70995 | Canola | cytosol | 15.2 | 24.85 |
| CDY35676 | Canola | cytoskeleton, cytosol, nucleus | 15.57 | 24.78 |
| CDY08601 | Canola | nucleus, plastid | 20.51 | 24.62 |
| Os09t0493700-01 | Rice | nucleus | 31.5 | 24.5 |
| CDY09128 | Canola | cytosol | 15.38 | 24.49 |
| CDY21575 | Canola | nucleus | 19.23 | 24.19 |
| CDY28745 | Canola | cytosol | 21.06 | 24.06 |
| CDY00677 | Canola | nucleus | 19.6 | 24.04 |
| CDX78356 | Canola | nucleus | 15.93 | 23.97 |
| CDY20351 | Canola | cytosol, golgi, nucleus | 14.84 | 23.89 |
| CDX69911 | Canola | nucleus | 19.05 | 23.74 |
| CDX73920 | Canola | nucleus | 19.41 | 23.71 |
| KXG35937 | Sorghum | nucleus | 30.77 | 23.7 |
| CDX73921 | Canola | cytosol, nucleus, plastid | 19.78 | 23.68 |
| CDY34714 | Canola | cytosol, golgi, nucleus | 14.65 | 23.67 |
| CDX92368 | Canola | cytosol | 14.47 | 23.58 |
| TraesCS5D01G279100.2 | Wheat | nucleus, peroxisome, plastid | 29.49 | 23.57 |
| CDY43143 | Canola | nucleus | 20.51 | 23.43 |
| CDY49932 | Canola | nucleus | 20.15 | 22.96 |
| TraesCS5A01G271500.2 | Wheat | nucleus | 30.4 | 22.74 |
| HORVU5Hr1G074230.30 | Barley | nucleus, plastid | 31.5 | 22.69 |
| CDX78734 | Canola | cytosol | 20.33 | 22.65 |
| CDY16943 | Canola | nucleus | 20.51 | 22.54 |
| CDY41354 | Canola | cytosol, nucleus, plastid | 22.16 | 22.53 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 22.53 | 22.12 |
| CDX70745 | Canola | cytosol | 19.96 | 22.06 |
| CDX70227 | Canola | cytosol, nucleus, vacuole | 22.16 | 21.84 |
| CDY11289 | Canola | cytosol, nucleus, vacuole | 22.34 | 21.55 |
| CDY00208 | Canola | nucleus | 17.03 | 21.53 |
| CDX88115 | Canola | cytosol | 17.4 | 21.44 |
| CDY44853 | Canola | cytosol, nucleus, vacuole | 21.98 | 21.43 |
| CDY19828 | Canola | nucleus | 17.4 | 21.35 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 20.15 | 21.32 |
| CDY70628 | Canola | golgi | 15.38 | 21.21 |
| CDY05939 | Canola | nucleus | 17.77 | 20.95 |
| CDX80455 | Canola | nucleus | 17.4 | 20.83 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 19.78 | 20.81 |
| CDY08139 | Canola | nucleus | 17.03 | 20.04 |
| CDY60870 | Canola | nucleus | 20.33 | 19.24 |
| CDY34716 | Canola | nucleus | 10.26 | 19.05 |
| CDY21216 | Canola | nucleus | 14.65 | 18.6 |
| CDY16427 | Canola | nucleus | 20.15 | 18.49 |
| CDY26922 | Canola | nucleus | 20.15 | 17.3 |
| CDY66161 | Canola | nucleus | 19.78 | 17.01 |
| TraesCS5B01G271800.1 | Wheat | cytosol, golgi, peroxisome | 17.95 | 16.7 |
| CDX87118 | Canola | nucleus | 17.58 | 11.54 |
| CDX69392 | Canola | nucleus | 8.97 | 11.45 |
| CDX86969 | Canola | cytosol | 1.47 | 7.48 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078GS92 | UniProt:A0A078GS92 | EnsemblPlants:CDY28401 | ProteinID:CDY28401 |
| ProteinID:CDY28401.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| EnsemblPlantsGene:GSBRNA2T00040233001 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 |
| PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF27 | SUPFAM:SSF101941 | TMHMM:TMhelix | UniParc:UPI0004EE1E04 |
| SEG:seg | : | : | : | : | : |
Description
BnaA05g18390DBnaA05g18390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GS92]
Coordinates
chrLK032219:+:209289..211596
Molecular Weight (calculated)
61117.3 Da
IEP (calculated)
4.601
GRAVY (calculated)
-0.567
Length
546 amino acids
Sequence
(BLAST)
(BLAST)
001: MANPCPNSCF KEGKFTVPGF RFHPTDEELV MYYLKRKMYR KRLTVNAIGV VDVYKIEPDD LPGESVLKTG DRQWFYFTPR SRKYPNAARS GRGTATGYWK
101: ATGKDPVIVY NSRSVGLKKT LVFYRGRAPT GERTDWVMHE YTMNEEELHP CKNAKDYYAL YKLFKKSGSG PKNGEDYGAP FQEKEWVDDD SDSDSEDGDD
201: IALPEEPLAL VRHEDTRFVD NARLFEPVNV QLDDFEEIPQ ICINGLASSV PQVNREEEIQ STLVNNSSGE FLKPQQTGRF LPNGEPYIRP SSSGVEPFVF
301: EKEDYIEMDD LLASELAVER PAQFLNPGEF GDFNEFDQLF HDVSMSLDME PIAQGASVHP SSPSKFADNK SNEKQQFQDQ IPENKVNNNN LDDFTDNMWF
401: QDDDDQAVLF DQPQSITSGA FAPLPSSGVM PGSTNLTVSA QDQEGENGGG TSPFTSALWA FMDSIPSTPA SACEGPINRT FVRMSSFSRI RYSKKVNGTP
501: PVTSTVVAKK RSRNRGFLVL SIVGALCAIF WVFIATVQAS GRPVLS
101: ATGKDPVIVY NSRSVGLKKT LVFYRGRAPT GERTDWVMHE YTMNEEELHP CKNAKDYYAL YKLFKKSGSG PKNGEDYGAP FQEKEWVDDD SDSDSEDGDD
201: IALPEEPLAL VRHEDTRFVD NARLFEPVNV QLDDFEEIPQ ICINGLASSV PQVNREEEIQ STLVNNSSGE FLKPQQTGRF LPNGEPYIRP SSSGVEPFVF
301: EKEDYIEMDD LLASELAVER PAQFLNPGEF GDFNEFDQLF HDVSMSLDME PIAQGASVHP SSPSKFADNK SNEKQQFQDQ IPENKVNNNN LDDFTDNMWF
401: QDDDDQAVLF DQPQSITSGA FAPLPSSGVM PGSTNLTVSA QDQEGENGGG TSPFTSALWA FMDSIPSTPA SACEGPINRT FVRMSSFSRI RYSKKVNGTP
501: PVTSTVVAKK RSRNRGFLVL SIVGALCAIF WVFIATVQAS GRPVLS
001: MVDSSRDSCF KAGKFSAPGF RFHPTDEELV VYYLKRKICC KKLRVNAIGV VDVYKVDPSE LPGLSMLKTG DRQWFFFTPR NRKYPNAARS SRGTATGYWK
101: ATGKDRVIEY NSRSVGLKKT LVFYRGRAPN GERTDWVMHE YTMDEEELGR CKNAKEYYAL YKLYKKSGAG PKNGEQYGAP FQEEEWVDSD SEDADSVAVP
201: DYPVVRYENG PCVDDTKFCN PVKLQLEDIE KLLNEIPDAP GVNQRQFDEF VGVPQGNSAE VIQSTLLNNS SGEYIDPRTN GMFLPNGQLY NRDSSFQSHL
301: NSFEATSGMA PLLDNEKEEY IEMNDLLIPE LGASSTEKST EFLNHGEFGD VNEYDQLFND ISVFQGTSTD LSCLSNFTNN TSGQRQQLLY EQFQYQTPEN
401: QLNNYMHPST TLNQFTDNMW FKDDQAALYV QPPQSSSGAF TSQSTGVMPE SMNPTMSVNP QYKEGQNGGG TRSQFSSALW ELLESIPSTP ASACEGPLNQ
501: TFVRMSSFSR IRFNGTSVTS RKVTVAKKRI SNRGFLLLSI MGALCAIFWV FKATVGVMGR PLLS
101: ATGKDRVIEY NSRSVGLKKT LVFYRGRAPN GERTDWVMHE YTMDEEELGR CKNAKEYYAL YKLYKKSGAG PKNGEQYGAP FQEEEWVDSD SEDADSVAVP
201: DYPVVRYENG PCVDDTKFCN PVKLQLEDIE KLLNEIPDAP GVNQRQFDEF VGVPQGNSAE VIQSTLLNNS SGEYIDPRTN GMFLPNGQLY NRDSSFQSHL
301: NSFEATSGMA PLLDNEKEEY IEMNDLLIPE LGASSTEKST EFLNHGEFGD VNEYDQLFND ISVFQGTSTD LSCLSNFTNN TSGQRQQLLY EQFQYQTPEN
401: QLNNYMHPST TLNQFTDNMW FKDDQAALYV QPPQSSSGAF TSQSTGVMPE SMNPTMSVNP QYKEGQNGGG TRSQFSSALW ELLESIPSTP ASACEGPLNQ
501: TFVRMSSFSR IRFNGTSVTS RKVTVAKKRI SNRGFLLLSI MGALCAIFWV FKATVGVMGR PLLS
Arabidopsis Description
anac016NAC domain containing protein 16 [Source:TAIR;Acc:AT1G34180]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.