Factsheet for TraesCS5B01G271800.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, cytosol

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, peroxisome
Any Predictor:	cytosol, golgi, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G271500.2	Wheat	nucleus	93.02	74.79
TraesCS5D01G279100.2	Wheat	nucleus, peroxisome, plastid	85.35	73.35
HORVU5Hr1G074230.30	Barley	nucleus, plastid	87.56	67.81
Os09t0493700-01	Rice	nucleus	56.39	47.15
KXG35937	Sorghum	nucleus	52.98	43.86
GSMUA_AchrUn_...	Banana	nucleus	20.1	20.74
Bra028039.1-P	Field mustard	nucleus	18.57	19.6
AT1G34190.1	Thale cress	nucleus	18.57	19.57
GSMUA_Achr8P24280_001	Banana	nucleus	19.42	19.42
Bra036744.1-P	Field mustard	nucleus	18.06	19.38
CDX93723	Canola	nucleus	18.23	19.24
CDX73305	Canola	nucleus	16.7	18.81
CDY46459	Canola	nucleus	9.71	18.75
CDX91785	Canola	nucleus	17.21	18.74
CDY48632	Canola	cytosol, nucleus, plastid	17.89	18.65
KRG91745	Soybean	nucleus	17.38	18.58
CDY28397	Canola	nucleus	17.89	18.17
Bra034439.1-P	Field mustard	nucleus	17.89	18.17
AT1G34180.2	Thale cress	nucleus	17.72	18.06
CDY28401	Canola	cytosol, nucleus, plastid	16.7	17.95
PGSC0003DMT400043681	Potato	nucleus	17.89	17.92
KRH35027	Soybean	nucleus	17.04	17.86
CDX73304	Canola	nucleus	17.72	17.84
Bra034436.1-P	Field mustard	cytosol, nucleus, plastid	16.52	17.77
VIT_18s0001g01820.t01	Wine grape	nucleus	17.21	17.66
Solyc12g056790.1.1	Tomato	nucleus	17.38	17.29
Solyc04g072220.2.1	Tomato	cytosol, nucleus, plastid	17.21	16.86
CDY25752	Canola	nucleus	14.48	16.7
Bra012342.1-P	Field mustard	nucleus	14.48	16.7
AT1G32870.3	Thale cress	nucleus	15.16	15.78
CDY12515	Canola	plastid	14.48	15.6
PGSC0003DMT400079995	Potato	nucleus	18.57	12.1
TraesCS6B01G033000.1	Wheat	nucleus	6.64	10.68
TraesCS2B01G616900.1	Wheat	nucleus	6.3	9.11
TraesCS7B01G196900.1	Wheat	nucleus	9.88	9.02
TraesCS3B01G208300.2	Wheat	cytosol	6.64	8.11
TraesCS5B01G356100.1	Wheat	nucleus	2.9	7.83
TraesCS1B01G277300.1	Wheat	nucleus	5.45	7.41
TraesCS5B01G356000.1	Wheat	nucleus	3.24	7.34
TraesCS6B01G451300.1	Wheat	nucleus	8.01	7.33
TraesCS7B01G187600.1	Wheat	nucleus	7.5	6.28
TraesCS4B01G350600.1	Wheat	cytosol, nucleus, peroxisome	7.16	6.08
TraesCS1B01G192200.1	Wheat	cytosol, nucleus, plastid	3.58	5.75

Protein Annotations

EnsemblPlants:TraesCS5B01G271800.1	EnsemblPlantsGene:TraesCS5B01G271800	PANTHER:PTHR31989	PANTHER:PTHR31989:SF106	SEG:seg	TMHMM:TMhelix
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr5B:-:457131563..457134495

Molecular Weight (calculated)

63793.1 Da

IEP (calculated)

3.994

GRAVY (calculated)

-0.393

Length

587 amino acids

Sequence
(BLAST)

001: MHEYTILADA LPPPARGRES YALYKLFEKS GVGPKNGEQY GAPFREEDWL DDDGDCELLA DPIPIAVSLP TRTVTVDEQI GDVLTVVDQI GDVTVDKQIG
101: VITVDDQIGD LEVFLLQNGD GQGNSEPQSD FSTPVTSQAP LQHVHPQGRP SDDGNTSEVA DATTSSRGMV MAENTCTELP FGDLEGLLME ISDDQRATKS
201: FQEFSDSVPQ LQLQHDDHEV WLNANMEEIS VADYTTTSGV MDASECTGTE LPYGDLEGLL LQLENGHENI ELADFSAPVT HHEFHQVGAG DFHGCHGATF
301: NSVDPSSAVQ ENRDLDPRPE PSNQITQSAL TNMPLNWETE CTEETSALRS VSGLASYDGQ DADEEFLEIN DFLDPEDVGQ QSMNCTATEH LISASNGMFD
401: SLEFADASMF LPGSFDTAGV VTENQFGYLG DSGSQNQGFQ YTSESWTHNQ VALNVRNHMN HNHVVFSHAS GTANFHTVNE QPHNLSPADS QSWFNSAVSA
501: LLDAVPANPA LAAENNVLNR TLQRISSFRS EQAPKEEASA PVIQVRRRGA GLISFSLLVL LAAILWTFAA GTGYAIKFCK GLWKPST

Best Arabidopsis Sequence Match ( AT1G34190.1 )
(BLAST)

001: MADSSPDSCF KGGKFSAPGF RFHPTDEELV MYYLKRKICR KRLRVNVIGV VDVYKMDPEE LPGQSMLKTG DRQWFYFTPR SRKYPNAARS NRGTENGYWK
101: ATGKDRVIEY NSRSVGLKKT LVFYRGRAPS GERTDWVMHE YTMDEDELGR CKNPQEYYAL YKLFKKSGAG PKNGEQYGAP FQEEEWVDDD NEDVNAIAVA
201: VPEQPVVRYE DARRVDERRL FNPVILQLED IDELLNGIPN APGVPQRCIP QVNSEEELQS TLVNNSAREF LPNGQQYNRP SSFDSLETAE VTSAPLVFEK
301: EDFIEMDDLL LIPEFGASST EKAAQFSNHG EFDDFNEFDQ LFHDVSMSLD MEPIDQGTSA NLSSLSDSAN YTSDQKQQLL YQQFQDQTPE NQLNNIMDPS
401: TTLNQITSDI WFEDDQAILF DQQQSFSGAF ASPSSGVMPD STNPTMSVNA QGHEIQNGGG TTSQFSSALW ALMDSIPSTP ASACEGPLNR TFVRMSSFSR
501: MRFNGKANGT PVSTTIAKKG IRNRGFLLLS IVGALCAIFW VLVATVRVSG RSLLLKD

Arabidopsis Description

NAC017NAC017 [Source:UniProtKB/TrEMBL;Acc:A0A178WNW4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.