Factsheet for Bra028039.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93723	Canola	nucleus	96.04	96.04
Bra036744.1-P	Field mustard	nucleus	76.8	78.06
Bra034436.1-P	Field mustard	cytosol, nucleus, plastid	71.94	73.26
Bra034439.1-P	Field mustard	nucleus	67.63	65.05
VIT_18s0001g01820.t01	Wine grape	nucleus	44.06	42.83
Bra012342.1-P	Field mustard	nucleus	35.61	38.9
Solyc04g072220.2.1	Tomato	cytosol, nucleus, plastid	41.73	38.73
PGSC0003DMT400043681	Potato	nucleus	40.29	38.23
Solyc12g056790.1.1	Tomato	nucleus	40.47	38.14
Bra022236.1-P	Field mustard	nucleus	16.73	37.96
Bra012626.1-P	Field mustard	nucleus	16.91	32.87
Bra025012.1-P	Field mustard	nucleus	17.09	32.76
GSMUA_AchrUn_...	Banana	nucleus	33.45	32.69
Bra022046.1-P	Field mustard	nucleus	17.09	32.31
Bra013272.1-P	Field mustard	nucleus	16.91	32.19
GSMUA_Achr8P24280_001	Banana	nucleus	33.63	31.86
Bra035488.1-P	Field mustard	nucleus	16.37	31.82
Bra030807.1-P	Field mustard	nucleus	17.09	30.74
Bra003335.1-P	Field mustard	nucleus	16.37	30.23
Bra024263.1-P	Field mustard	nucleus	17.27	27.91
PGSC0003DMT400079995	Potato	nucleus	42.09	25.97
Bra034118.1-P	Field mustard	nucleus	19.6	25.89
Bra001366.1-P	Field mustard	nucleus	19.42	25.65
Bra001365.1-P	Field mustard	nucleus	19.78	25.52
Bra006619.1-P	Field mustard	cytosol	15.47	25.52
Os09t0493700-01	Rice	nucleus	32.19	25.5
TraesCS5D01G279100.2	Wheat	nucleus, peroxisome, plastid	30.94	25.18
Bra028640.1-P	Field mustard	nucleus	17.99	25.06
Bra034119.1-P	Field mustard	nucleus	19.78	25.0
Bra029844.1-P	Field mustard	nucleus, plastid	20.32	24.84
TraesCS5A01G271500.2	Wheat	nucleus	32.55	24.79
Bra012024.1-P	Field mustard	cytosol, golgi, nucleus	15.29	24.64
KXG35937	Sorghum	nucleus	31.3	24.54
HORVU5Hr1G074230.30	Barley	nucleus, plastid	33.27	24.41
Bra020182.1-P	Field mustard	cytosol	14.93	24.2
Bra002403.1-P	Field mustard	cytosol	14.03	24.07
Bra006019.1-P	Field mustard	nucleus	15.65	23.97
Bra021471.1-P	Field mustard	cytosol, golgi, nucleus	14.57	23.96
Bra034120.1-P	Field mustard	cytosol, nucleus, plastid	23.02	23.84
Bra021366.1-P	Field mustard	nucleus	20.5	23.75
Bra032009.1-P	Field mustard	nucleus	20.32	23.64
Bra006392.1-P	Field mustard	cytosol	20.5	23.27
Bra028790.1-P	Field mustard	cytosol, nucleus, plastid	20.86	23.02
Bra019599.1-P	Field mustard	nucleus	17.81	22.92
Bra009379.1-P	Field mustard	nucleus	18.53	22.69
Bra009456.1-P	Field mustard	cytosol, nucleus, plastid	22.48	22.56
Bra005804.1-P	Field mustard	cytosol, nucleus, vacuole	22.66	22.22
Bra036520.1-P	Field mustard	nucleus	17.63	22.02
Bra039745.1-P	Field mustard	nucleus	21.04	21.43
Bra009774.1-P	Field mustard	nucleus	17.45	21.32
Bra017980.1-P	Field mustard	nucleus	17.09	20.52
Bra008567.1-P	Field mustard	nucleus	16.37	20.36
TraesCS5B01G271800.1	Wheat	cytosol, golgi, peroxisome	19.6	18.57
Bra010193.1-P	Field mustard	nucleus	19.78	17.3

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra028039	EnsemblPlants:Bra028039.1	EnsemblPlants:Bra028039.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	InterPro:IPR003441	InterPro:IPR036093
UniProt:M4EGX4	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989
PANTHER:PTHR31989:SF27	SUPFAM:SSF101941	TMHMM:TMhelix	UniParc:UPI0002542181	:	:

Description

AT1G34190 (E=2e-223) anac017 | anac017 (Arabidopsis NAC domain containing protein 17); transcription factor

Coordinates

chrA09:-:19133850..19135998

Molecular Weight (calculated)

61671.8 Da

IEP (calculated)

4.341

GRAVY (calculated)

-0.455

Length

556 amino acids

Sequence
(BLAST)

001: MADSWLKGGK LSAPGFRFHP TDEELVMYYL KRKICKTRLR VSAIGVVDVY KLDPEELPGQ SVLKSGDRQW FFFTPRNRKY PNAARSGRCT ATGYWKATGK
101: DRVIVYDSRS VGLKKTLVFY RGRAPNGERT DWVMHEYTMD EDELGRCNTA KEYYALYKLF KKSGAGPKNG EDYGAPFQEE EWVDDVNEVG DSNIPVNEES
201: VTRRVDNATL FNPVNVQLDD VEEILNGIPY APGVPQTCIS GLASIIPQVN SQEEELPSTL VNNSSGDFLP NVQPYNMPST FESTEATSVP NDSGMGPFVF
301: EQEDYIEMDD LLTSELGASS TEKPEQLLDP GEFREFNEFD QLFHDVSMFL DMDPILQGTS ADPSSLSNFA NTSDQEDQSL YQQFQDQTPE NKLNNIMDPN
401: PNLSQFTDNL WFQDDYQAVL FDQPHSIISG AFASPSSGVD VMPGSTNLTT SVTAQDQEGE NGGGGTSPFS SALCAFMDSI PSTPASACEG PINRTFVRMS
501: SFSRMRFGGT PATTTFVAKK RSRNRGFLVL SIVGALCAIF WVFIATVRAS GRPVFS

Best Arabidopsis Sequence Match ( AT1G34190.1 )
(BLAST)

001: MADSSPDSCF KGGKFSAPGF RFHPTDEELV MYYLKRKICR KRLRVNVIGV VDVYKMDPEE LPGQSMLKTG DRQWFYFTPR SRKYPNAARS NRGTENGYWK
101: ATGKDRVIEY NSRSVGLKKT LVFYRGRAPS GERTDWVMHE YTMDEDELGR CKNPQEYYAL YKLFKKSGAG PKNGEQYGAP FQEEEWVDDD NEDVNAIAVA
201: VPEQPVVRYE DARRVDERRL FNPVILQLED IDELLNGIPN APGVPQRCIP QVNSEEELQS TLVNNSAREF LPNGQQYNRP SSFDSLETAE VTSAPLVFEK
301: EDFIEMDDLL LIPEFGASST EKAAQFSNHG EFDDFNEFDQ LFHDVSMSLD MEPIDQGTSA NLSSLSDSAN YTSDQKQQLL YQQFQDQTPE NQLNNIMDPS
401: TTLNQITSDI WFEDDQAILF DQQQSFSGAF ASPSSGVMPD STNPTMSVNA QGHEIQNGGG TTSQFSSALW ALMDSIPSTP ASACEGPLNR TFVRMSSFSR
501: MRFNGKANGT PVSTTIAKKG IRNRGFLLLS IVGALCAIFW VLVATVRVSG RSLLLKD

Arabidopsis Description

NAC017NAC017 [Source:UniProtKB/TrEMBL;Acc:A0A178WNW4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.