Factsheet for TraesCS5D01G279100.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus

Predictor Summary:

nucleus 1
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, peroxisome, plastid
Any Predictor:	nucleus, peroxisome, plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G271500.2	Wheat	nucleus	96.49	90.27
TraesCS5B01G271800.1	Wheat	cytosol, golgi, peroxisome	73.35	85.35
HORVU5Hr1G074230.30	Barley	nucleus, plastid	90.04	81.13
Os09t0493700-01	Rice	nucleus	62.52	60.83
KXG35937	Sorghum	nucleus	58.57	56.42
CDY46459	Canola	nucleus	18.59	41.78
TraesCS5D01G360800.1	Wheat	nucleus	12.15	38.25
GSMUA_AchrUn_...	Banana	nucleus	28.55	34.27
TraesCS5D01G360700.1	Wheat	nucleus	12.74	33.59
GSMUA_Achr8P24280_001	Banana	nucleus	27.53	32.03
Bra036744.1-P	Field mustard	nucleus	24.89	31.08
Bra028039.1-P	Field mustard	nucleus	25.18	30.94
AT1G34190.1	Thale cress	nucleus	25.18	30.88
CDX73305	Canola	nucleus	23.43	30.71
KRG91745	Soybean	nucleus	24.6	30.6
CDX93723	Canola	nucleus	24.89	30.58
AT1G34180.2	Thale cress	nucleus	25.48	30.21
PGSC0003DMT400043681	Potato	nucleus	25.92	30.2
CDY48632	Canola	cytosol, nucleus, plastid	24.89	30.2
CDY25752	Canola	nucleus	22.4	30.06
Bra012342.1-P	Field mustard	nucleus	22.4	30.06
VIT_18s0001g01820.t01	Wine grape	nucleus	25.04	29.9
CDX91785	Canola	nucleus	23.57	29.87
KRH35027	Soybean	nucleus	24.45	29.82
CDY28401	Canola	cytosol, nucleus, plastid	23.57	29.49
CDY28397	Canola	nucleus	24.89	29.41
Bra034439.1-P	Field mustard	nucleus	24.89	29.41
Solyc12g056790.1.1	Tomato	nucleus	25.33	29.32
Bra034436.1-P	Field mustard	cytosol, nucleus, plastid	23.43	29.3
CDX73304	Canola	nucleus	24.89	29.16
Solyc04g072220.2.1	Tomato	cytosol, nucleus, plastid	25.18	28.71
CDY12515	Canola	plastid	22.4	28.07
AT1G32870.3	Thale cress	nucleus	22.84	27.66
TraesCS2D01G567000.1	Wheat	cytosol	14.79	24.88
TraesCS1D01G194200.2	Wheat	cytosol, nucleus, plastid	13.32	24.8
TraesCS1D01G266500.1	Wheat	nucleus	13.62	23.54
TraesCS2D01G568000.1	Wheat	nucleus	13.03	20.46
PGSC0003DMT400079995	Potato	nucleus	26.65	20.2
TraesCS7D01G283800.1	Wheat	nucleus	18.59	19.66
TraesCS3D01G183900.2	Wheat	cytosol	14.2	19.4
TraesCS6D01G390200.1	Wheat	cytosol, nucleus, peroxisome	16.69	17.76
TraesCS4D01G345300.1	Wheat	cytosol, nucleus, peroxisome	16.11	15.76
TraesCS7D01G295100.1	Wheat	nucleus	15.08	14.82

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR31989	PANTHER:PTHR31989:SF106	SUPFAM:SSF101941	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5D01G279100	EnsemblPlants:TraesCS5D01G279100.2
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:381032860..381036909

Molecular Weight (calculated)

75054.5 Da

IEP (calculated)

4.378

GRAVY (calculated)

-0.528

Length

683 amino acids

Sequence
(BLAST)

001: METPPPPPRW PPGFRFSPTD EELVLFFLKR RVAAGRPSPY IADVDVYKSH PSHLPERSAL RTGDKQWFFC SRLDRKYPNG SRASRTTADG YWKATGKDRS
101: ICNAGRAVGN KKTLVYHHGR APRGERTDWV MHEYTILADA LPPPARCRES YALYKLFEKS GVGPKNGEQY GAPFREEDWL DDDDDCELPS DPIPIAVSLP
201: RAVTVDEQIG DVLTVVEQIG GVTVDKQIGV MTVDDQLGDL EVFLLQNGDD LGNSEPQSDF STPVSSQAPL QHGHPQGRPS DDGNISEVAD ATTSSRGMVM
301: AVNTCTELPF GDLEGLLMEI SDDQRATESF EEFSEFIPQL QLQHDDHEHE AWPNANMEEI SVADYATSNG VVDASGCTVT ELPYEDIEGL LLQLENDQGN
401: VQPLADFSTP VPRHEFHQVG SGDFHGCHGA TFNSVDPSSA VQENRDLDPR SEPSNQITQS ALTNMPLNWE TDCTEETSAL RSVSGLASYD GQDAEEEFLE
501: INDFLDPEDV GQTGVATENQ FGYLGDSGSQ NQGFQYTSES WTHNQVALNV RNHMNHNHVV FSHASGTANF HTVNEQPHNL SPADSQSWFN SAVSALLDAV
601: PANPALAAEN NVLNRTLQRI SSFRSEQAPK EEASAPVIQV RRRGAGLISV SLLVLLAAIM WTFAAGTGYA IKFCKGLWKS SST

Best Arabidopsis Sequence Match ( AT1G34180.1 )
(BLAST)

001: MVDSSRDSCF KAGKFSAPGF RFHPTDEELV VYYLKRKICC KKLRVNAIGV VDVYKVDPSE LPGLSMLKTG DRQWFFFTPR NRKYPNAARS SRGTATGYWK
101: ATGKDRVIEY NSRSVGLKKT LVFYRGRAPN GERTDWVMHE YTMDEEELGR CKNAKEYYAL YKLYKKSGAG PKNGEQYGAP FQEEEWVDSD SEDADSVAVP
201: DYPVVRYENG PCVDDTKFCN PVKLQLEDIE KLLNEIPDAP GVNQRQFDEF VGVPQGNSAE VIQSTLLNNS SGEYIDPRTN GMFLPNGQLY NRDSSFQSHL
301: NSFEATSGMA PLLDNEKEEY IEMNDLLIPE LGASSTEKST EFLNHGEFGD VNEYDQLFND ISVFQGTSTD LSCLSNFTNN TSGQRQQLLY EQFQYQTPEN
401: QLNNYMHPST TLNQFTDNMW FKDDQAALYV QPPQSSSGAF TSQSTGVMPE SMNPTMSVNP QYKEGQNGGG TRSQFSSALW ELLESIPSTP ASACEGPLNQ
501: TFVRMSSFSR IRFNGTSVTS RKVTVAKKRI SNRGFLLLSI MGALCAIFWV FKATVGVMGR PLLS

Arabidopsis Description

anac016NAC domain containing protein 16 [Source:TAIR;Acc:AT1G34180]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.