Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G34190.1 | Thale cress | nucleus | 70.49 | 72.89 |
| CDY28397 | Canola | nucleus | 72.4 | 72.15 |
| Bra034439.1-P | Field mustard | nucleus | 72.4 | 72.15 |
| CDX73304 | Canola | nucleus | 72.57 | 71.7 |
| VIT_18s0001g01820.t01 | Wine grape | nucleus | 41.67 | 41.96 |
| AT1G32870.3 | Thale cress | nucleus | 38.19 | 39.01 |
| Solyc12g056790.1.1 | Tomato | nucleus | 38.72 | 37.8 |
| Solyc04g072220.2.1 | Tomato | cytosol, nucleus, plastid | 39.24 | 37.73 |
| PGSC0003DMT400043681 | Potato | nucleus | 38.37 | 37.71 |
| AT3G17730.1 | Thale cress | nucleus | 15.62 | 36.59 |
| AT1G32510.1 | Thale cress | nucleus | 16.32 | 33.22 |
| AT1G54330.1 | Thale cress | nucleus | 16.84 | 32.23 |
| AT4G17980.2 | Thale cress | nucleus | 15.97 | 31.51 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.08 | 31.46 |
| GSMUA_Achr8P24280_001 | Banana | nucleus | 31.77 | 31.18 |
| AT5G46590.1 | Thale cress | nucleus | 15.8 | 31.16 |
| AT5G64060.1 | Thale cress | nucleus | 17.36 | 28.09 |
| PGSC0003DMT400079995 | Potato | nucleus | 40.28 | 25.75 |
| TraesCS5D01G279100.2 | Wheat | nucleus, peroxisome, plastid | 30.21 | 25.48 |
| AT2G27300.1 | Thale cress | nucleus | 14.58 | 25.07 |
| AT3G10490.2 | Thale cress | nucleus | 19.44 | 24.83 |
| TraesCS5A01G271500.2 | Wheat | nucleus | 31.25 | 24.66 |
| Os09t0493700-01 | Rice | nucleus | 30.03 | 24.64 |
| AT5G22290.1 | Thale cress | cytosol | 14.41 | 24.41 |
| KXG35937 | Sorghum | nucleus | 30.03 | 24.4 |
| HORVU5Hr1G074230.30 | Barley | nucleus, plastid | 31.25 | 23.75 |
| AT3G44290.1 | Thale cress | cytosol | 13.72 | 23.58 |
| AT3G10500.1 | Thale cress | cytosol, nucleus, vacuole | 21.88 | 22.95 |
| AT3G03200.1 | Thale cress | nucleus | 18.92 | 22.76 |
| AT5G17260.1 | Thale cress | nucleus | 18.58 | 22.48 |
| AT5G04410.1 | Thale cress | cytosol, nucleus, plastid | 22.05 | 22.4 |
| AT5G24590.2 | Thale cress | nucleus | 17.53 | 22.39 |
| AT5G09330.5 | Thale cress | nucleus | 18.75 | 22.09 |
| AT3G10480.3 | Thale cress | plastid | 19.79 | 21.67 |
| AT3G49530.1 | Thale cress | nucleus | 16.32 | 20.04 |
| AT4G35580.2 | Thale cress | nucleus | 17.53 | 18.91 |
| AT1G65910.1 | Thale cress | nucleus | 19.97 | 18.23 |
| TraesCS5B01G271800.1 | Wheat | cytosol, golgi, peroxisome | 18.06 | 17.72 |
| AT1G33060.2 | Thale cress | nucleus | 19.27 | 17.02 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:840317 | ProteinID:ANM60647.1 | ArrayExpress:AT1G34180 | EnsemblPlantsGene:AT1G34180 |
| RefSeq:AT1G34180 | TAIR:AT1G34180 | RefSeq:AT1G34180-TAIR-G | EnsemblPlants:AT1G34180.2 | TAIR:AT1G34180.2 | Unigene:At.39788 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 |
| InterPro:NAC-dom | InterPro:NAC_dom_sf | RefSeq:NP_001322919.1 | PFAM:PF02365 | PO:PO:0000293 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009031 |
| PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020100 | PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF27 |
| SUPFAM:SSF101941 | TMHMM:TMhelix | UniParc:UPI000009E63E | Symbol:anac016 | SEG:seg | : |
Description
anac016NAC domain containing protein 16 [Source:TAIR;Acc:AT1G34180]
Coordinates
chr1:+:12448726..12451287
Molecular Weight (calculated)
64843.9 Da
IEP (calculated)
4.971
GRAVY (calculated)
-0.561
Length
576 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDSSRDSCF KAGKFSAPGF RFHPTDEELV VYYLKRKICC KKLRVNAIGV VDVYKVDPSE LPGNFQHLLI DFDSCLSMLK TGDRQWFFFT PRNRKYPNAA
101: RSSRGTATGY WKATGKDRVI EYNSRSVGLK KTLVFYRGRA PNGERTDWVM HEYTMDEEEL GRCKNAKEYY ALYKLYKKSG AGPKNGEQYG APFQEEEWVD
201: SDSEDADSVA VPDYPVVRYE NGPCVDDTKF CNPVKLQLED IEKLLNEIPD APGVNQRQFD EFVGVPQGNS AEVIQSTLLN NSSGEYIDPR TNGMFLPNGQ
301: LYNRDSSFQS HLNSFEATSG MAPLLDNEKE EYIEMNDLLI PELGASSTEK STEFLNHGEF GDVNEYDQLF NDISVFQGTS TDLSCLSNFT NNTSGQRQQL
401: LYEQFQYQTP ENQLNNYMHP STTLNQFTDN MWFKDDQAAL YVQPPQSSSG AFTSQSTGVM PESMNPTMSV NPQYKEGQNG GGTRSQFSSA LWELLESIPS
501: TPASACEGPL NQTFVRMSSF SRIRFNGTSV TSRKVTVAKK RISNRGFLLL SIMGALCAIF WVFKATVGVM GRPLLS
101: RSSRGTATGY WKATGKDRVI EYNSRSVGLK KTLVFYRGRA PNGERTDWVM HEYTMDEEEL GRCKNAKEYY ALYKLYKKSG AGPKNGEQYG APFQEEEWVD
201: SDSEDADSVA VPDYPVVRYE NGPCVDDTKF CNPVKLQLED IEKLLNEIPD APGVNQRQFD EFVGVPQGNS AEVIQSTLLN NSSGEYIDPR TNGMFLPNGQ
301: LYNRDSSFQS HLNSFEATSG MAPLLDNEKE EYIEMNDLLI PELGASSTEK STEFLNHGEF GDVNEYDQLF NDISVFQGTS TDLSCLSNFT NNTSGQRQQL
401: LYEQFQYQTP ENQLNNYMHP STTLNQFTDN MWFKDDQAAL YVQPPQSSSG AFTSQSTGVM PESMNPTMSV NPQYKEGQNG GGTRSQFSSA LWELLESIPS
501: TPASACEGPL NQTFVRMSSF SRIRFNGTSV TSRKVTVAKK RISNRGFLLL SIMGALCAIF WVFKATVGVM GRPLLS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.