Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70227 | Canola | cytosol, nucleus, vacuole | 82.01 | 83.94 |
| Bra009456.1-P | Field mustard | cytosol, nucleus, plastid | 81.48 | 83.39 |
| CDY44853 | Canola | cytosol, nucleus, vacuole | 81.13 | 82.14 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 80.07 | 81.65 |
| CDY11289 | Canola | cytosol, nucleus, vacuole | 79.19 | 79.33 |
| Bra028790.1-P | Field mustard | cytosol, nucleus, plastid | 70.19 | 78.97 |
| Bra005804.1-P | Field mustard | cytosol, nucleus, vacuole | 78.84 | 78.84 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 71.43 | 78.49 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 71.43 | 78.03 |
| AT3G10500.1 | Thale cress | cytosol, nucleus, vacuole | 69.49 | 71.77 |
| KRH34662 | Soybean | cytosol | 10.41 | 64.84 |
| VIT_13s0019g05240.t01 | Wine grape | cytosol, nucleus, plastid | 46.91 | 47.59 |
| Solyc05g055470.2.1 | Tomato | nucleus | 44.44 | 46.32 |
| PGSC0003DMT400060090 | Potato | nucleus | 42.86 | 45.42 |
| Solyc11g008000.1.1 | Tomato | nucleus | 41.45 | 44.51 |
| PGSC0003DMT400079789 | Potato | cytosol, nucleus, plastid | 41.45 | 43.28 |
| AT3G17730.1 | Thale cress | nucleus | 18.17 | 41.87 |
| AT1G54330.1 | Thale cress | nucleus | 18.52 | 34.88 |
| AT5G64060.1 | Thale cress | nucleus | 21.87 | 34.83 |
| KRG92121 | Soybean | cytosol | 36.33 | 34.11 |
| AT5G46590.1 | Thale cress | nucleus | 16.93 | 32.88 |
| AT4G17980.2 | Thale cress | nucleus | 16.75 | 32.53 |
| AT3G10490.2 | Thale cress | nucleus | 25.57 | 32.15 |
| AT1G32510.1 | Thale cress | nucleus | 15.87 | 31.8 |
| TraesCS6D01G390200.1 | Wheat | cytosol, nucleus, peroxisome | 32.1 | 28.35 |
| AT3G10480.3 | Thale cress | plastid | 26.28 | 28.33 |
| TraesCS6A01G406700.1 | Wheat | cytosol, golgi, nucleus | 31.92 | 28.11 |
| HORVU6Hr1G093050.4 | Barley | cytosol, golgi, nucleus | 31.39 | 27.77 |
| EES06041 | Sorghum | nucleus | 31.92 | 27.76 |
| Os02t0822400-01 | Rice | nucleus | 30.86 | 27.69 |
| TraesCS7D01G283800.1 | Wheat | nucleus | 31.22 | 27.4 |
| TraesCS7B01G196900.1 | Wheat | nucleus | 31.04 | 27.37 |
| AT2G27300.1 | Thale cress | nucleus | 16.05 | 27.16 |
| HORVU7Hr1G060310.1 | Barley | nucleus | 30.69 | 26.93 |
| OQU80699 | Sorghum | plastid | 31.75 | 26.87 |
| Os08t0562200-02 | Rice | nucleus | 31.04 | 26.83 |
| Zm00001d049913_P001 | Maize | plastid | 30.16 | 26.8 |
| AT3G44290.1 | Thale cress | cytosol | 15.7 | 26.57 |
| Zm00001d051879_P001 | Maize | nucleus | 30.69 | 26.48 |
| AT5G09330.5 | Thale cress | nucleus | 22.75 | 26.38 |
| Zm00001d031898_P001 | Maize | plastid | 30.86 | 26.2 |
| AT5G22290.1 | Thale cress | cytosol | 15.52 | 25.88 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.69 | 25.73 |
| GSMUA_Achr9P20400_001 | Banana | nucleus, peroxisome, plastid | 26.81 | 25.33 |
| GSMUA_Achr9P23580_001 | Banana | plastid | 26.28 | 25.13 |
| TraesCSU01G135000.1 | Wheat | nucleus | 31.39 | 25.11 |
| AT3G03200.1 | Thale cress | nucleus | 20.99 | 24.84 |
| AT5G17260.1 | Thale cress | nucleus | 19.93 | 23.74 |
| GSMUA_Achr2P04010_001 | Banana | plastid | 26.63 | 23.56 |
| TraesCS6B01G451300.1 | Wheat | nucleus | 26.63 | 23.56 |
| AT1G32870.3 | Thale cress | nucleus | 23.28 | 23.4 |
| AT1G34190.1 | Thale cress | nucleus | 22.4 | 22.8 |
| AT5G24590.2 | Thale cress | nucleus | 17.64 | 22.17 |
| AT1G34180.2 | Thale cress | nucleus | 22.4 | 22.05 |
| AT3G49530.1 | Thale cress | nucleus | 17.81 | 21.54 |
| AT1G65910.1 | Thale cress | nucleus | 22.75 | 20.44 |
| AT4G35580.2 | Thale cress | nucleus | 17.99 | 19.1 |
| AT1G33060.2 | Thale cress | nucleus | 19.58 | 17.02 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:830320 | ProteinID:AAN46238.1 | ProteinID:AAN46239.1 | ProteinID:AAN46240.1 |
| ProteinID:AAN46241.1 | ProteinID:AAN46242.1 | ProteinID:AAN46243.1 | ProteinID:AAN46244.1 | ProteinID:AAN46245.1 | ProteinID:AAN46246.1 |
| ProteinID:AED90739.1 | EMBL:AF201456 | ArrayExpress:AT5G04410 | EnsemblPlantsGene:AT5G04410 | RefSeq:AT5G04410 | TAIR:AT5G04410 |
| RefSeq:AT5G04410-TAIR-G | EnsemblPlants:AT5G04410.1 | TAIR:AT5G04410.1 | EMBL:AY099609 | EMBL:AY128859 | Unigene:At.22852 |
| ProteinID:CAB85547.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 |
| GO:GO:0009644 | GO:GO:0009962 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0045893 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | Symbol:NAC2 | InterPro:NAC_dom_sf | RefSeq:NP_196061.1 |
| PFAM:PF02365 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF43 | UniProt:Q84K00 | SUPFAM:SSF101941 | TMHMM:TMhelix | UniParc:UPI000009DA17 |
| SEG:seg | : | : | : | : | : |
Description
NAC078NAC domain-containing protein 78 [Source:UniProtKB/Swiss-Prot;Acc:Q84K00]
Coordinates
chr5:+:1243684..1246684
Molecular Weight (calculated)
63514.0 Da
IEP (calculated)
4.384
GRAVY (calculated)
-0.594
Length
567 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGSVTSLA PGFRFHPTDE ELVRYYLKRK VCNKPFKFDA ISVTDIYKSE PWDLPDKSKL KSRDLEWYFF SMLDKKYSNG SKTNRATEKG YWKTTGKDRE
101: IRNGSRVVGM KKTLVYHKGR APRGERTNWV MHEYRLSDED LKKAGVPQEA YVLCRIFQKS GTGPKNGEQY GAPYLEEEWE EDGMTYVPAQ DAFSEGLALN
201: DDVYVDIDDI DEKPENLVVY DAVPILPNYC HGESSNNVES GNYSDSGNYI QPGNNVVDSG GYFEQPIETF EEDRKPIIRE GSIQPCSLFP EEQIGCGVQD
301: ENVVNLESSN NNVFVADTCY SDIPIDHNYL PDEPFMDPNN NLPLNDGLYL ETNDLSCAQQ DDFNFEDYLS FFDDEGLTFD DSLLMGPEDF LPNQEALDQK
401: PAPKELEKEV AGGKEAVEEK ESGEGSSSKQ DTDFKDFDSA PKYPFLKKTS HMLGAIPTPS SFASQFQTKD AMRLHAAQSS GSVHVTAGMM RISNMTLAAD
501: SGMGWSYDKN GNLNVVLSFG VVQQDDAMTA SGSKTGITAT RAMLVFMCLW VLLLSVSFKI VTMVSAR
101: IRNGSRVVGM KKTLVYHKGR APRGERTNWV MHEYRLSDED LKKAGVPQEA YVLCRIFQKS GTGPKNGEQY GAPYLEEEWE EDGMTYVPAQ DAFSEGLALN
201: DDVYVDIDDI DEKPENLVVY DAVPILPNYC HGESSNNVES GNYSDSGNYI QPGNNVVDSG GYFEQPIETF EEDRKPIIRE GSIQPCSLFP EEQIGCGVQD
301: ENVVNLESSN NNVFVADTCY SDIPIDHNYL PDEPFMDPNN NLPLNDGLYL ETNDLSCAQQ DDFNFEDYLS FFDDEGLTFD DSLLMGPEDF LPNQEALDQK
401: PAPKELEKEV AGGKEAVEEK ESGEGSSSKQ DTDFKDFDSA PKYPFLKKTS HMLGAIPTPS SFASQFQTKD AMRLHAAQSS GSVHVTAGMM RISNMTLAAD
501: SGMGWSYDKN GNLNVVLSFG VVQQDDAMTA SGSKTGITAT RAMLVFMCLW VLLLSVSFKI VTMVSAR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.