Factsheet for AT3G44290.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20351	Canola	cytosol, golgi, nucleus	87.46	86.43
CDY34714	Canola	cytosol, golgi, nucleus	85.97	85.21
Bra021471.1-P	Field mustard	cytosol, golgi, nucleus	85.67	84.91
CDY34716	Canola	nucleus	71.64	81.63
AT5G22290.1	Thale cress	cytosol	64.78	63.82
AT2G27300.1	Thale cress	nucleus	41.19	41.19
KRH22653	Soybean	nucleus	40.6	36.66
VIT_06s0080g00970.t01	Wine grape	nucleus	41.79	36.08
PGSC0003DMT400015077	Potato	nucleus	40.6	33.33
PGSC0003DMT400050482	Potato	nucleus	42.69	33.26
Solyc06g074170.2.1	Tomato	nucleus	40.3	33.01
Solyc11g068750.1.1	Tomato	nucleus, plasma membrane	42.39	31.42
AT3G17730.1	Thale cress	nucleus	22.69	30.89
AT1G32510.1	Thale cress	nucleus	23.88	28.27
KRH26664	Soybean	nucleus	41.49	28.19
AT5G46590.1	Thale cress	nucleus	24.48	28.08
AT1G54330.1	Thale cress	nucleus	25.07	27.91
AT4G17980.2	Thale cress	nucleus	23.28	26.71
AT5G64060.1	Thale cress	nucleus	24.48	23.03
AT5G17260.1	Thale cress	nucleus	27.76	19.54
AT3G03200.1	Thale cress	nucleus	27.16	19.0
AT3G10490.2	Thale cress	nucleus	25.37	18.85
AT5G24590.2	Thale cress	nucleus	25.37	18.85
AT3G49530.1	Thale cress	nucleus	25.97	18.55
AT5G09330.5	Thale cress	nucleus	26.27	18.0
AT3G10480.3	Thale cress	plastid	25.97	16.54
AT4G35580.2	Thale cress	nucleus	25.97	16.29
AT5G04410.1	Thale cress	cytosol, nucleus, plastid	26.57	15.7
AT3G10500.1	Thale cress	cytosol, nucleus, vacuole	25.67	15.66
AT1G32870.3	Thale cress	nucleus	25.97	15.43
AT1G34190.1	Thale cress	nucleus	23.88	14.36
AT1G33060.2	Thale cress	nucleus	27.76	14.26
AT1G65910.1	Thale cress	nucleus	26.27	13.95
AT1G34180.2	Thale cress	nucleus	23.58	13.72

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EntrezGene:823554	ProteinID:AEE77885.1	ArrayExpress:AT3G44290	EnsemblPlantsGene:AT3G44290
RefSeq:AT3G44290	TAIR:AT3G44290	RefSeq:AT3G44290-TAIR-G	EnsemblPlants:AT3G44290.1	TAIR:AT3G44290.1	EMBL:BX823820
ProteinID:CAB88997.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0019725	GO:GO:0071333	InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom
InterPro:NAC_dom_sf	RefSeq:NP_190015.1	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF40
UniProt:Q9LXL9	SUPFAM:SSF101941	TMHMM:TMhelix	UniParc:UPI00000A0352	Symbol:anac060	SEG:seg

Description

NAC60NAC domain-containing protein 60 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXL9]

Coordinates

chr3:-:15972764..15975183

Molecular Weight (calculated)

38064.6 Da

IEP (calculated)

5.295

GRAVY (calculated)

-0.298

Length

335 amino acids

Sequence
(BLAST)

001: MAAAPPIEPA VTTTFPGFKF SPTDIELISY YLKRKMDGLE RSVEIIPEVE IYNFEPWDLP DKSIVKSDSE WFFFCARGKK YPHGSQNRRA TKIGYWKATG
101: KERNVKSGSE VIGTKRTLVF HIGRAPKGGR TEWLMHEYCM IGVSLDALVI CRLRRNTEFQ GSTIQKPPQP SLPLDKHVNL RNEAISESIY GWETMVDFYL
201: SSESGQELLS EIAESSQSSQ NPQVPSEEDF YADILRDEIV KLDDPAVSGN TLINVPRLQT ESNTTRVLPL PDMVDKQMQS LLQKLPLQND TGEENNISMS
301: NCFIGIYSIK SINRARWDVV VWLLVMIAVL VFYLV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.