Factsheet for Bra005804.1-P

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11289	Canola	cytosol, nucleus, vacuole	99.47	99.65
CDY58437	Canola	cytosol, nucleus, plastid	91.89	93.7
Bra009456.1-P	Field mustard	cytosol, nucleus, plastid	79.54	81.41
Bra028790.1-P	Field mustard	cytosol, nucleus, plastid	70.72	79.56
AT5G04410.1	Thale cress	cytosol, nucleus, plastid	78.84	78.84
KRH34662	Soybean	cytosol	10.58	65.93
Bra034120.1-P	Field mustard	cytosol, nucleus, plastid	58.02	61.27
VIT_13s0019g05240.t01	Wine grape	cytosol, nucleus, plastid	46.03	46.69
Solyc05g055470.2.1	Tomato	nucleus	42.68	44.49
Solyc11g008000.1.1	Tomato	nucleus	40.39	43.37
PGSC0003DMT400060090	Potato	nucleus	40.92	43.36
PGSC0003DMT400079789	Potato	cytosol, nucleus, plastid	41.09	42.91
Bra022236.1-P	Field mustard	nucleus	18.17	42.04
Bra025012.1-P	Field mustard	nucleus	18.52	36.21
Bra030807.1-P	Field mustard	nucleus	19.4	35.6
Bra003335.1-P	Field mustard	nucleus	18.69	35.22
Bra024263.1-P	Field mustard	nucleus	21.34	35.17
Bra022046.1-P	Field mustard	nucleus	17.99	34.69
Bra012626.1-P	Field mustard	nucleus	17.46	34.62
Bra034119.1-P	Field mustard	nucleus	26.28	33.86
Bra035488.1-P	Field mustard	nucleus	16.93	33.57
Bra013272.1-P	Field mustard	nucleus	17.28	33.56
Bra034118.1-P	Field mustard	nucleus	24.52	33.02
Bra001365.1-P	Field mustard	nucleus	25.04	32.95
KRG92121	Soybean	cytosol	34.92	32.78
Bra029844.1-P	Field mustard	nucleus, plastid	25.22	31.43
Bra028640.1-P	Field mustard	nucleus	21.87	31.08
Bra001366.1-P	Field mustard	nucleus	22.93	30.88
Bra006019.1-P	Field mustard	nucleus	19.4	30.3
Bra009379.1-P	Field mustard	nucleus	23.1	28.85
TraesCS6D01G390200.1	Wheat	cytosol, nucleus, peroxisome	31.75	28.04
TraesCS6A01G406700.1	Wheat	cytosol, golgi, nucleus	31.75	27.95
HORVU6Hr1G093050.4	Barley	cytosol, golgi, nucleus	31.22	27.61
Zm00001d049913_P001	Maize	plastid	30.86	27.43
EES06041	Sorghum	nucleus	31.22	27.15
Os02t0822400-01	Rice	nucleus	30.16	27.06
GSMUA_AchrUn_...	Banana	nucleus	22.75	26.99
Os08t0562200-02	Rice	nucleus	31.04	26.83
Bra020182.1-P	Field mustard	cytosol	16.23	26.82
Bra006619.1-P	Field mustard	cytosol	15.87	26.71
TraesCS7B01G196900.1	Wheat	nucleus	30.16	26.59
OQU80699	Sorghum	plastid	31.39	26.57
TraesCS7D01G283800.1	Wheat	nucleus	30.16	26.47
Bra002403.1-P	Field mustard	cytosol	14.99	26.23
Zm00001d031898_P001	Maize	plastid	30.86	26.2
HORVU7Hr1G060310.1	Barley	nucleus	29.81	26.16
Bra012024.1-P	Field mustard	cytosol, golgi, nucleus	15.87	26.09
GSMUA_Achr9P20400_001	Banana	nucleus, peroxisome, plastid	27.34	25.83
Bra021471.1-P	Field mustard	cytosol, golgi, nucleus	15.34	25.74
Zm00001d051879_P001	Maize	nucleus	29.81	25.72
Bra012342.1-P	Field mustard	nucleus	22.57	25.15
GSMUA_Achr9P23580_001	Banana	plastid	26.28	25.13
Bra032009.1-P	Field mustard	nucleus	21.16	25.1
Bra021366.1-P	Field mustard	nucleus	20.99	24.79
TraesCSU01G135000.1	Wheat	nucleus	30.16	24.12
Bra006392.1-P	Field mustard	cytosol	20.81	24.08
GSMUA_Achr2P04010_001	Banana	plastid	26.98	23.87
TraesCS6B01G451300.1	Wheat	nucleus	26.63	23.56
Bra019599.1-P	Field mustard	nucleus	17.81	23.38
Bra039745.1-P	Field mustard	nucleus	21.87	22.71
Bra028039.1-P	Field mustard	nucleus	22.22	22.66
Bra036744.1-P	Field mustard	nucleus	21.69	22.49
Bra034436.1-P	Field mustard	cytosol, nucleus, plastid	21.34	22.16
Bra036520.1-P	Field mustard	nucleus	17.28	22.02
Bra017980.1-P	Field mustard	nucleus	17.81	21.81
Bra034439.1-P	Field mustard	nucleus	22.05	21.63
Bra009774.1-P	Field mustard	nucleus	17.28	21.54
Bra008567.1-P	Field mustard	nucleus	16.93	21.48
Bra010193.1-P	Field mustard	nucleus	19.58	17.45

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra005804	EnsemblPlants:Bra005804.1	EnsemblPlants:Bra005804.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	InterPro:IPR003441	InterPro:IPR036093
UniProt:M4CNL6	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989
PANTHER:PTHR31989:SF43	SUPFAM:SSF101941	TMHMM:TMhelix	UniParc:UPI000253FBA0	SEG:seg	:

Description

AT5G04410 (E=5e-243) NAC2, anac078 | NAC2; transcription factor

Coordinates

chrA03:+:723714..726003

Molecular Weight (calculated)

62913.7 Da

IEP (calculated)

4.323

GRAVY (calculated)

-0.613

Length

567 amino acids

Sequence
(BLAST)

001: MGRGSATSLA PGFRFHPTDE ELVRYYLKRK VCNKPFKLDA ISVTDVYKSE PWDLPDKSKL KSRDLEWYFF SMLDKKYNNG SKTNRATEKG YWKTTGKDRE
101: IRNGSRAVGM KKTLVYHKGR APRGERTNWV MHEYRLTDEE LKRTGAPQDA FVLCRIFQKS GTGPKNGEQY GAPYLEEEWE EDKMTFVPEQ EALSEGLGFD
201: DDVYLGIDEF EEKPDNLVVY DAIPVDPNYF HGESSNNVES GNYSDSGNFI QPGNFAVDSG GCFGQTIETF GEDQKPIIRD GSIQPCSLFP NEQNVCGVHD
301: ENAVNLETSN SNVFAAENCY SDIPIDDTNY MPDESFIDPS NNLPLTDGLY LEGNDLGNAL PDDFDFEDYL DFFGDEDGQN LTLDVSQLLG SEDALPEQEG
401: GLEQIQPSSG DLEKEVAQGK EAVEKDESGE GSTSKHDADV TDFDSASKYP FLKKASQMCG ATSSFASQFQ TKARLHAGQP SGSVHVTAGI IRISNMNLAA
501: DMGWSYDKNN NLNVVLSFGS VQRDDGMSSS VNKTGGVPAT RAMLIFLCLW ILLLSVSFKI GTMVSAR

Best Arabidopsis Sequence Match ( AT5G04410.1 )
(BLAST)

001: MGRGSVTSLA PGFRFHPTDE ELVRYYLKRK VCNKPFKFDA ISVTDIYKSE PWDLPDKSKL KSRDLEWYFF SMLDKKYSNG SKTNRATEKG YWKTTGKDRE
101: IRNGSRVVGM KKTLVYHKGR APRGERTNWV MHEYRLSDED LKKAGVPQEA YVLCRIFQKS GTGPKNGEQY GAPYLEEEWE EDGMTYVPAQ DAFSEGLALN
201: DDVYVDIDDI DEKPENLVVY DAVPILPNYC HGESSNNVES GNYSDSGNYI QPGNNVVDSG GYFEQPIETF EEDRKPIIRE GSIQPCSLFP EEQIGCGVQD
301: ENVVNLESSN NNVFVADTCY SDIPIDHNYL PDEPFMDPNN NLPLNDGLYL ETNDLSCAQQ DDFNFEDYLS FFDDEGLTFD DSLLMGPEDF LPNQEALDQK
401: PAPKELEKEV AGGKEAVEEK ESGEGSSSKQ DTDFKDFDSA PKYPFLKKTS HMLGAIPTPS SFASQFQTKD AMRLHAAQSS GSVHVTAGMM RISNMTLAAD
501: SGMGWSYDKN GNLNVVLSFG VVQQDDAMTA SGSKTGITAT RAMLVFMCLW VLLLSVSFKI VTMVSAR

Arabidopsis Description

NAC078NAC domain-containing protein 78 [Source:UniProtKB/Swiss-Prot;Acc:Q84K00]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.