Factsheet for TraesCS6B01G033000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G003800.1	Wheat	nucleus	89.04	86.21
TraesCS2B01G616900.1	Wheat	nucleus	74.52	67.0
Solyc03g078120.2.1	Tomato	cytosol	20.27	49.33
OQU82661	Sorghum	nucleus	51.51	46.42
Zm00001d002945_P010	Maize	cytosol	51.51	46.08
TraesCS5B01G356100.1	Wheat	nucleus	22.47	37.79
KRH43549	Soybean	cytosol	30.68	34.67
CDY44793	Canola	nucleus	32.05	33.43
CDX81124	Canola	nucleus	30.96	33.04
Bra024263.1-P	Field mustard	nucleus	30.14	31.98
CDY43785	Canola	nucleus	30.14	31.98
CDX84485	Canola	nucleus	30.14	31.79
TraesCS5B01G356000.1	Wheat	nucleus	22.47	31.66
KRH59567	Soybean	cytosol, golgi, nucleus	27.4	31.55
AT5G64060.1	Thale cress	nucleus	30.14	30.9
TraesCS1B01G277300.1	Wheat	nucleus	35.89	30.32
Bra028640.1-P	Field mustard	nucleus	30.68	28.07
CDX78356	Canola	nucleus	27.12	27.27
Bra006019.1-P	Field mustard	nucleus	27.12	27.27
CDX69911	Canola	nucleus	32.6	27.17
CDY21575	Canola	nucleus	32.05	26.96
KRH64046	Soybean	nucleus	34.79	26.29
Bra009379.1-P	Field mustard	nucleus	32.6	26.21
KRH53893	Soybean	nucleus	34.25	24.85
AT5G09330.5	Thale cress	nucleus	31.78	23.72
TraesCS1B01G192200.1	Wheat	cytosol, nucleus, plastid	23.29	23.29
PGSC0003DMT400073779	Potato	nucleus	34.52	23.25
VIT_04s0044g01220.t01	Wine grape	nucleus	31.78	20.71
TraesCS3B01G208300.2	Wheat	cytosol	26.85	20.37
Solyc11g005920.1.1	Tomato	nucleus	35.34	18.78
TraesCS7B01G196900.1	Wheat	nucleus	32.6	18.51
TraesCS4B01G350600.1	Wheat	cytosol, nucleus, peroxisome	28.77	15.2
TraesCS6B01G451300.1	Wheat	nucleus	23.56	13.42
TraesCS7B01G187600.1	Wheat	nucleus	24.66	12.84
TraesCS5B01G271800.1	Wheat	cytosol, golgi, peroxisome	10.68	6.64

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR31989	PANTHER:PTHR31989:SF46	SUPFAM:SSF101941	EnsemblPlantsGene:TraesCS6B01G033000	EnsemblPlants:TraesCS6B01G033000.1	SEG:seg

Description

No Description!

Coordinates

chr6B:+:19319215..19321276

Molecular Weight (calculated)

40049.0 Da

IEP (calculated)

5.574

GRAVY (calculated)

-0.492

Length

365 amino acids

Sequence
(BLAST)

001: MEVAPLPPGY RFQPTDVELI LYYLKRKILG KKLRRNAVTE IDIYKFAPWD LPGKSSMPTG DLQWYFFCTC GREYPTGSRT NRSNQAGHWK ATGKDRKVVY
101: NSRTVGMKRT LVFHAGKGRK EKRTDWVMHE YRLVESEIPN AGVRLDDFVL CKVYQKSGPG PKIGEQYGAP FEEEEEEMND DPNGEAYCLS HSSAPGPSHG
201: GVLNSAGQSV CDGGRTSLSI LSANNGKSSS SGVHPDRASR PDVNWDRIHI QQLADILGCL STNHVGQDGP SSDSTTYHDT EALFDDSEAI FDITDQVVPS
301: SLVSLCKQCD SCGVRLIDPL LEPVAGEVYL ELNDLLLCHA GHVPDGSSQA LVLSSGACHE GPPMD

Best Arabidopsis Sequence Match ( AT3G10500.1 )
(BLAST)

001: MGRGSVTSLA PGFRFHPTDE ELVRYYLKRK ICNKPFKFDA ISVTDVYKSE PWDLPDKSRL KSRDLEWYFF SMLDKKYRNG SKTNRATEMG YWKTTGKDRE
101: ILNGSKVVGM KKTLVYHKGR APRGERTNWV MHEYRLVDQD LDKTGVHQDA FVLCRIFQKS GSGPKNGEQY GAPFVEEEWE EEDDMTFVPD QEDLGSEDHV
201: YVHMDDIDQK SENFVVYDAI PIPLNFIHGE SSNNVETNYS DSINYIQQTG NYMDSGGYFE QPAESYEKDQ KPIIRDRDGS LQNEGIGCGV QDKHSETLQS
301: SDNIFGTDTS CYNDFPVESN YLIGEAFLDP NSNLLENDGL YLETNDLSST QQDGFDFEDY LTFFDETFDP SQLMGNEDVF FDQEELFQEV ETKELEKEET
401: SRSKHVVEEK EKDEASCSKQ VDADATEFEP DYKYPLLKKA SHMLGAIPAP LANASEFPTK DAAIRLHAAQ SSGSVHVTAG MITISDSNMG WSYGKNENLD
501: LILSLGLVQG NTAPEKSGNS SAWAMLIFMC FWVLLLSVSF KVSILVSSR

Arabidopsis Description

NAC053NAC domain-containing protein 53 [Source:UniProtKB/Swiss-Prot;Acc:Q949N0]
SUBAcon: [vacuole,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.