Factsheet for Zm00001d002945_P010

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
nucleus 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU82661	Sorghum	nucleus	83.09	83.7
Solyc03g078120.2.1	Tomato	cytosol	20.34	55.33
TraesCS6B01G033000.1	Wheat	nucleus	46.08	51.51
TraesCS2D01G567000.1	Wheat	cytosol	49.26	49.51
TraesCS2B01G616900.1	Wheat	nucleus	49.02	49.26
TraesCSU01G137200.2	Wheat	cytosol, nucleus, plastid	48.04	48.28
TraesCS6A01G003800.1	Wheat	nucleus	44.61	48.28
HORVU2Hr1G127510.1	Barley	nucleus	47.06	47.76
HORVU2Hr1G127550.1	Barley	nucleus	47.06	47.76
Zm00001d021423_P001	Maize	nucleus	20.83	38.99
CDX81124	Canola	nucleus	32.11	38.3
CDY44793	Canola	nucleus	32.35	37.71
KRH43549	Soybean	cytosol	29.17	36.84
Zm00001d021424_P001	Maize	nucleus	22.06	36.73
Bra024263.1-P	Field mustard	nucleus	30.15	35.76
CDY43785	Canola	nucleus	30.15	35.76
CDX84485	Canola	nucleus	29.9	35.26
AT5G64060.1	Thale cress	nucleus	30.64	35.11
KRH59567	Soybean	cytosol, golgi, nucleus	25.98	33.44
Zm00001d010227_P003	Maize	nucleus	36.03	33.03
Bra028640.1-P	Field mustard	nucleus	31.62	32.33
Zm00001d038227_P001	Maize	nucleus	35.05	31.64
CDX78356	Canola	nucleus	27.94	31.41
Bra006019.1-P	Field mustard	nucleus	27.94	31.41
CDY21575	Canola	nucleus	32.35	30.41
CDX69911	Canola	nucleus	32.35	30.14
Bra009379.1-P	Field mustard	nucleus	32.35	29.07
AT5G09330.5	Thale cress	nucleus	33.58	28.02
Zm00001d047050_P001	Maize	cytosol, nucleus, plastid	21.32	27.97
KRH64046	Soybean	nucleus	32.11	27.12
KRH53893	Soybean	nucleus	32.35	26.24
Zm00001d030023_P001	Maize	cytosol, nucleus, plastid	21.57	25.66
PGSC0003DMT400073779	Potato	nucleus	33.82	25.46
VIT_04s0044g01220.t01	Wine grape	nucleus	33.58	24.46
Solyc11g005920.1.1	Tomato	nucleus	35.54	21.11
Zm00001d049913_P001	Maize	plastid	32.84	21.0
Zm00001d031898_P001	Maize	plastid	33.58	20.51
Zm00001d008308_P002	Maize	plastid	21.32	20.23
Zm00001d040318_P001	Maize	cytosol, endoplasmic reticulum, nucleus	23.77	18.76
Zm00001d051879_P001	Maize	nucleus	29.9	18.57
Zm00001d027395_P009	Maize	nucleus	28.19	17.32
Zm00001d048493_P004	Maize	nucleus	28.19	16.74
Zm00001d049540_P002	Maize	cytosol	21.57	13.31
Zm00001d024543_P001	Maize	nucleus	20.83	12.8

Protein Annotations

EntrezGene:100383817	EntrezGene:100502273	MapMan:15.5.17	Gene3D:3.30.310.150	EMBL:BT068371	EMBL:BT068532
EMBL:BT083901	UniProt:C0PJA2	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003441	InterPro:IPR036093	EMBL:KJ727952	InterPro:NAC-dom	InterPro:NAC_dom_sf	ProteinID:ONM15753.1
ProteinID:ONM15754.1	ProteinID:ONM15755.1	ProteinID:ONM15756.1	ProteinID:ONM15758.1	ProteinID:ONM15760.1	PFAM:PF02365
PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF46	SUPFAM:SSF101941	UniParc:UPI000189CF94	EnsemblPlantsGene:Zm00001d002945
EnsemblPlants:Zm00001d002945_P010	EnsemblPlants:Zm00001d002945_T010	SEG:seg	:	:	:

Description

ras-related protein18A1 ras-related protein18A1

Coordinates

chr2:+:27817481..27825275

Molecular Weight (calculated)

44756.6 Da

IEP (calculated)

5.053

GRAVY (calculated)

-0.333

Length

408 amino acids

Sequence
(BLAST)

001: MAKTSLPPGF RFHPTDVELT VYYLKRKLLG KHLRCNAITE IDLYKFAPWD LPERASLESN DLVWYFFCPR DRKYSSGLRT NRSTGVGYWK ATGKDRPVVY
101: NSRTVGMKRT LVFHLGKPPR GDRTDWVMYE YRLEDEEIAA SGVKLDACVL CKIFQKSGPG PKIGAQYGAP FNEEDWNDAS NVECSPCVPS VAPCAPESSR
201: GGLNSAGQRL AVSYDVKVSL GSSAEGINRP AVNGVHPVRP SPDAPNDCIH IQLLAEVMRC SSTSMHVLRT AGDDGLLADS TADYSSDNRI SLDAIETIFC
301: EVDELGPQAM VNNTNHCDSC GEYLIHPTMV ARGAEQYLEL NDLSFSLTDG PDSCGVLFSN GVSVEQLPDL ELRFEQFSPD HISNTAIAST STTVGSSASV
401: PLLEDHRT

Best Arabidopsis Sequence Match ( AT5G09330.1 )
(BLAST)

001: MGKTQLAPGF RFHPTDVELV RYYLKRKILG KKLLVDAIAE VDIYKFEPPD LPDMSFIRSG DLKWHFFCPR EKKYASGVRA NRATECGYWK TTGKERPVLC
101: NSEVVGKIKT LVYHFGKSPR GERTDWVMHE YRLDDKVLTQ MNVPQDTYVV CVLFKKDGPG PRNGAQYGAP FKEEDWSDEE VRTDVPSTSN PTNLLEPSKE
201: TTLALTAPDD SNKDCFGGMI SESCVSDFLP ATTNTTSELP HPSDAATTPM STAPLAETVQ TPNNDDLYSM LDLFDDDEEF LGFNNNEVRY DPGVSAPVCL
301: EEEGIFNGLP ELSSMPRTAS YDLVENSELY LELQDLTAPL NPQTGLQDLT APFNPQTGLQ DLTAPFNHQT GLQDHTAPFN PQTGLQDHTA PFNHQTGLQD
401: LTAPFNPQTG LQDLTAPFNP QTGLHDLTSP FNPQTGLQDL TAPLNPQTGN RNDPRSSSFL YNQGHFDFSG GNDDDPYGFS ASMRHRPKM

Arabidopsis Description

NAC082NAC domain-containing protein 82 [Source:UniProtKB/Swiss-Prot;Acc:Q9FY82]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.