Factsheet for TraesCSU01G137200.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G616900.1	Wheat	nucleus	94.33	94.33
TraesCS2D01G567000.1	Wheat	cytosol	93.6	93.6
HORVU2Hr1G127550.1	Barley	nucleus	85.22	86.07
HORVU2Hr1G127510.1	Barley	nucleus	85.22	86.07
Solyc03g078120.2.1	Tomato	cytosol	18.97	51.33
Zm00001d002945_P010	Maize	cytosol	48.28	48.04
OQU82661	Sorghum	nucleus	47.54	47.65
KRH43549	Soybean	cytosol	28.57	35.91
CDY44793	Canola	nucleus	30.3	35.14
CDX81124	Canola	nucleus	29.56	35.09
CDY43785	Canola	nucleus	29.31	34.59
Bra024263.1-P	Field mustard	nucleus	29.31	34.59
CDX84485	Canola	nucleus	28.82	33.81
AT5G64060.1	Thale cress	nucleus	29.31	33.43
KRH59567	Soybean	cytosol, golgi, nucleus	25.86	33.12
Bra028640.1-P	Field mustard	nucleus	29.56	30.08
Bra006019.1-P	Field mustard	nucleus	26.35	29.48
CDX78356	Canola	nucleus	26.11	29.2
CDX69911	Canola	nucleus	31.28	29.0
CDY21575	Canola	nucleus	30.79	28.8
Bra009379.1-P	Field mustard	nucleus	31.28	27.97
KRH64046	Soybean	nucleus	32.51	27.33
KRH53893	Soybean	nucleus	32.76	26.44
AT5G09330.5	Thale cress	nucleus	30.54	25.36
PGSC0003DMT400073779	Potato	nucleus	32.76	24.54
VIT_04s0044g01220.t01	Wine grape	nucleus	32.51	23.57
TraesCSU01G163300.1	Wheat	cytoskeleton, nucleus, peroxisome	21.92	21.76
TraesCSU01G168500.1	Wheat	cytoskeleton, nucleus, peroxisome	21.92	21.76
TraesCSU01G215800.1	Wheat	cytoskeleton, nucleus, peroxisome	21.92	21.76
Solyc11g005920.1.1	Tomato	nucleus	34.24	20.23
TraesCSU01G135000.1	Wheat	nucleus	32.02	18.34

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR31989	PANTHER:PTHR31989:SF46	SUPFAM:SSF101941	EnsemblPlantsGene:TraesCSU01G137200	EnsemblPlants:TraesCSU01G137200.2	SEG:seg

Description

No Description!

Coordinates

chrUn:-:124814714..124816691

Molecular Weight (calculated)

42908.1 Da

IEP (calculated)

5.036

GRAVY (calculated)

-0.389

Length

406 amino acids

Sequence
(BLAST)

001: MEMPPLPPGY RFHPTDVELT LYYLKRKLLG KKLLCNAVAE VDIYKHAPWD LPAKSSMPTG DLQWYFFCTR GRKYSVGQRA NRSTEGGYWK ATGKDRQVVY
101: ENRTVGMKRT LVFHAGKAPK GTRTDWVMYE YRLVQGEIPD AGVRLDDSVL CKVHKKSGPG PKIGEQYGAP FEEEEEELND ANGNASCLSP SAPPAAPHSA
201: PGPSHGGVLN SVGQKLAAAS HGGGDSLSVS PANNGGTSGA GPDRASCLDV NWDSIHVEQL ADIIGRLSTN PVSQDGQSSD LTTANQDTEA VFGDSETIFE
301: ITDQIVPSSL CSSLCKQCDK CGVRLVDPLL EPAAGEPYVE LNDLLSRCRA AGQVADGSSS QAVVVSNGEG PVLDLELKLG VESSDSVGHS SGAVSAAASG
401: SGAPSS

Best Arabidopsis Sequence Match ( AT5G09330.1 )
(BLAST)

001: MGKTQLAPGF RFHPTDVELV RYYLKRKILG KKLLVDAIAE VDIYKFEPPD LPDMSFIRSG DLKWHFFCPR EKKYASGVRA NRATECGYWK TTGKERPVLC
101: NSEVVGKIKT LVYHFGKSPR GERTDWVMHE YRLDDKVLTQ MNVPQDTYVV CVLFKKDGPG PRNGAQYGAP FKEEDWSDEE VRTDVPSTSN PTNLLEPSKE
201: TTLALTAPDD SNKDCFGGMI SESCVSDFLP ATTNTTSELP HPSDAATTPM STAPLAETVQ TPNNDDLYSM LDLFDDDEEF LGFNNNEVRY DPGVSAPVCL
301: EEEGIFNGLP ELSSMPRTAS YDLVENSELY LELQDLTAPL NPQTGLQDLT APFNPQTGLQ DLTAPFNHQT GLQDHTAPFN PQTGLQDHTA PFNHQTGLQD
401: LTAPFNPQTG LQDLTAPFNP QTGLHDLTSP FNPQTGLQDL TAPLNPQTGN RNDPRSSSFL YNQGHFDFSG GNDDDPYGFS ASMRHRPKM

Arabidopsis Description

NAC082NAC domain-containing protein 82 [Source:UniProtKB/Swiss-Prot;Acc:Q9FY82]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.