Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G033000.1 | Wheat | nucleus | 86.21 | 89.04 |
| Solyc03g078120.2.1 | Tomato | cytosol | 19.1 | 48.0 |
| OQU82661 | Sorghum | nucleus | 48.28 | 44.94 |
| Zm00001d002945_P010 | Maize | cytosol | 48.28 | 44.61 |
| TraesCS5A01G220900.1 | Wheat | cytosol | 25.73 | 41.63 |
| TraesCS5A01G353500.1 | Wheat | nucleus | 21.49 | 37.33 |
| KRH43549 | Soybean | cytosol | 29.18 | 34.06 |
| CDY44793 | Canola | nucleus | 30.77 | 33.14 |
| CDX81124 | Canola | nucleus | 29.97 | 33.04 |
| KRH59567 | Soybean | cytosol, golgi, nucleus | 26.26 | 31.23 |
| CDY43785 | Canola | nucleus | 28.38 | 31.1 |
| Bra024263.1-P | Field mustard | nucleus | 28.38 | 31.1 |
| CDX84485 | Canola | nucleus | 28.38 | 30.92 |
| AT5G64060.1 | Thale cress | nucleus | 28.38 | 30.06 |
| TraesCS1A01G266300.2 | Wheat | nucleus | 33.42 | 29.37 |
| Bra028640.1-P | Field mustard | nucleus | 29.97 | 28.32 |
| CDX69911 | Canola | nucleus | 31.83 | 27.4 |
| CDY21575 | Canola | nucleus | 31.3 | 27.19 |
| KRH64046 | Soybean | nucleus | 34.75 | 27.12 |
| Bra006019.1-P | Field mustard | nucleus | 25.99 | 27.0 |
| CDX78356 | Canola | nucleus | 25.99 | 27.0 |
| Bra009379.1-P | Field mustard | nucleus | 31.83 | 26.43 |
| TraesCS1A01G190100.1 | Wheat | nucleus | 22.28 | 25.07 |
| KRH53893 | Soybean | nucleus | 33.42 | 25.05 |
| AT5G09330.5 | Thale cress | nucleus | 31.03 | 23.93 |
| TraesCS2A01G561800.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 22.28 | 23.66 |
| PGSC0003DMT400073779 | Potato | nucleus | 32.63 | 22.69 |
| TraesCS2A01G561700.1 | Wheat | nucleus | 23.87 | 21.23 |
| VIT_04s0044g01220.t01 | Wine grape | nucleus | 31.03 | 20.89 |
| TraesCS3A01G176500.1 | Wheat | cytosol | 24.93 | 18.8 |
| Solyc11g005920.1.1 | Tomato | nucleus | 33.95 | 18.63 |
| TraesCS6A01G406700.1 | Wheat | cytosol, golgi, nucleus | 29.44 | 17.24 |
| TraesCS5A01G519300.1 | Wheat | cytosol, nucleus, peroxisome | 27.32 | 14.84 |
| TraesCS5A01G271500.2 | Wheat | nucleus | 25.46 | 13.15 |
| TraesCS7A01G299600.3 | Wheat | nucleus | 23.34 | 12.55 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF46 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS6A01G003800 | EnsemblPlants:TraesCS6A01G003800.1 | SEG:seg |
Description
No Description!
Coordinates
chr6A:+:1672891..1674991
Molecular Weight (calculated)
41268.4 Da
IEP (calculated)
6.505
GRAVY (calculated)
-0.472
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMAPLPPGY RFQPTDAELI LYYLKRKILG KKLRPNPVTE IDIYQFAPWD LPGKSSMPTG DLQWYFFCTC GRKYPTGSRT NRSNQAGHWK ATGKDRKVVC
101: NSRTVGMKRT LVFHAGKGRK EKRTDWVMHE YRLVESEVPN AGVRLDDFVL CKVYQKSGPG PRIGEQYGAP LEEEEEEMND ANGEAYCLSH SSAPGPSHGG
201: VLNFAGQSVS DGGRVSLSLL SANNGKSSSS GVRPDRASHP DVNWDRIHIQ QLADILGFLS TNPVGQDGPP SDSTAYHDTE ALFDDSEAIF DIADQVVPSS
301: LVSLCKQCDS CGVRLVDPFL EPVAGEVYLE LNDLLLCHAG HVPHGSSHEG PQHWIRQRPF VHSSSAASGT VSAAVSG
101: NSRTVGMKRT LVFHAGKGRK EKRTDWVMHE YRLVESEVPN AGVRLDDFVL CKVYQKSGPG PRIGEQYGAP LEEEEEEMND ANGEAYCLSH SSAPGPSHGG
201: VLNFAGQSVS DGGRVSLSLL SANNGKSSSS GVRPDRASHP DVNWDRIHIQ QLADILGFLS TNPVGQDGPP SDSTAYHDTE ALFDDSEAIF DIADQVVPSS
301: LVSLCKQCDS CGVRLVDPFL EPVAGEVYLE LNDLLLCHAG HVPHGSSHEG PQHWIRQRPF VHSSSAASGT VSAAVSG
001: MGRGSVTSLA PGFRFHPTDE ELVRYYLKRK ICNKPFKFDA ISVTDVYKSE PWDLPDKSRL KSRDLEWYFF SMLDKKYRNG SKTNRATEMG YWKTTGKDRE
101: ILNGSKVVGM KKTLVYHKGR APRGERTNWV MHEYRLVDQD LDKTGVHQDA FVLCRIFQKS GSGPKNGEQY GAPFVEEEWE EEDDMTFVPD QEDLGSEDHV
201: YVHMDDIDQK SENFVVYDAI PIPLNFIHGE SSNNVETNYS DSINYIQQTG NYMDSGGYFE QPAESYEKDQ KPIIRDRDGS LQNEGIGCGV QDKHSETLQS
301: SDNIFGTDTS CYNDFPVESN YLIGEAFLDP NSNLLENDGL YLETNDLSST QQDGFDFEDY LTFFDETFDP SQLMGNEDVF FDQEELFQEV ETKELEKEET
401: SRSKHVVEEK EKDEASCSKQ VDADATEFEP DYKYPLLKKA SHMLGAIPAP LANASEFPTK DAAIRLHAAQ SSGSVHVTAG MITISDSNMG WSYGKNENLD
501: LILSLGLVQG NTAPEKSGNS SAWAMLIFMC FWVLLLSVSF KVSILVSSR
101: ILNGSKVVGM KKTLVYHKGR APRGERTNWV MHEYRLVDQD LDKTGVHQDA FVLCRIFQKS GSGPKNGEQY GAPFVEEEWE EEDDMTFVPD QEDLGSEDHV
201: YVHMDDIDQK SENFVVYDAI PIPLNFIHGE SSNNVETNYS DSINYIQQTG NYMDSGGYFE QPAESYEKDQ KPIIRDRDGS LQNEGIGCGV QDKHSETLQS
301: SDNIFGTDTS CYNDFPVESN YLIGEAFLDP NSNLLENDGL YLETNDLSST QQDGFDFEDY LTFFDETFDP SQLMGNEDVF FDQEELFQEV ETKELEKEET
401: SRSKHVVEEK EKDEASCSKQ VDADATEFEP DYKYPLLKKA SHMLGAIPAP LANASEFPTK DAAIRLHAAQ SSGSVHVTAG MITISDSNMG WSYGKNENLD
501: LILSLGLVQG NTAPEKSGNS SAWAMLIFMC FWVLLLSVSF KVSILVSSR
Arabidopsis Description
NAC053NAC domain-containing protein 53 [Source:UniProtKB/Swiss-Prot;Acc:Q949N0]
SUBAcon: [vacuole,nucleus,cytosol]
SUBAcon: [vacuole,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.