Factsheet for TraesCS5A01G519300.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G350600.1	Wheat	cytosol, nucleus, peroxisome	97.12	97.54
TraesCS4D01G345300.1	Wheat	cytosol, nucleus, peroxisome	97.98	97.42
HORVU4Hr1G085320.1	Barley	cytosol, nucleus, peroxisome	93.8	94.48
PGSC0003DMT400018364	Potato	mitochondrion, nucleus	13.4	80.17
Os03t0119966-01	Rice	nucleus	74.21	79.23
EER95621	Sorghum	nucleus	74.93	76.25
Zm00001d048493_P004	Maize	nucleus	72.33	73.07
Zm00001d027395_P009	Maize	nucleus	67.15	70.18
TraesCS5A01G353500.1	Wheat	nucleus	19.16	61.29
GSMUA_Achr11P...	Banana	nucleus	33.14	60.05
GSMUA_Achr1P02820_001	Banana	nucleus	30.69	57.26
GSMUA_AchrUn_...	Banana	nucleus	27.52	53.8
GSMUA_Achr8P13430_001	Banana	nucleus	44.38	50.74
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	39.91	49.82
PGSC0003DMT400055322	Potato	nucleus	36.31	44.84
VIT_04s0079g00280.t01	Wine grape	cytosol, nucleus, plasma membrane	42.8	44.46
KRH17271	Soybean	cytosol, nucleus, plasma membrane	40.63	43.79
Solyc02g036430.1.1	Tomato	nucleus	35.59	43.72
KRH72917	Soybean	cytosol, nucleus, plasma membrane	40.06	43.23
KRH30885	Soybean	cytosol, nucleus, vacuole	40.06	41.37
KRG98003	Soybean	cytosol, nucleus, plasma membrane	40.2	41.15
Bra039745.1-P	Field mustard	nucleus	31.99	40.66
AT5G17260.1	Thale cress	nucleus	27.67	40.34
CDY16943	Canola	nucleus	28.24	39.44
Bra006392.1-P	Field mustard	cytosol	27.67	39.18
CDX78734	Canola	cytosol	27.67	39.18
TraesCS5A01G220900.1	Wheat	cytosol	13.11	39.06
AT1G65910.1	Thale cress	nucleus	35.45	38.99
CDX70745	Canola	cytosol	27.67	38.87
CDY60870	Canola	nucleus	32.28	38.82
Bra021366.1-P	Field mustard	nucleus	26.51	38.33
CDY49932	Canola	nucleus	26.22	38.0
AT3G03200.1	Thale cress	nucleus	26.08	37.79
CDY43143	Canola	nucleus	25.94	37.66
TraesCS1A01G190100.1	Wheat	nucleus	18.16	37.61
Bra032009.1-P	Field mustard	nucleus	25.79	37.45
CDY28745	Canola	cytosol	25.79	37.45
CDY16427	Canola	nucleus	31.99	37.31
Bra008567.1-P	Field mustard	nucleus	22.77	35.35
CDY21216	Canola	nucleus	19.74	31.86
TraesCS1A01G266300.2	Wheat	nucleus	18.01	29.14
TraesCS6A01G003800.1	Wheat	nucleus	14.84	27.32
TraesCS2A01G561800.1	Wheat	cytosol, mitochondrion, nucleus, plastid	13.4	26.2
TraesCS2A01G561700.1	Wheat	nucleus	15.71	25.71
TraesCS3A01G176500.1	Wheat	cytosol	17.72	24.6
Solyc02g081270.2.1	Tomato	nucleus	36.02	24.3
TraesCS6A01G406700.1	Wheat	cytosol, golgi, nucleus	18.44	19.88
TraesCS7A01G299600.3	Wheat	nucleus	19.02	18.83
TraesCS5A01G271500.2	Wheat	nucleus	16.28	15.48

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR31989	PANTHER:PTHR31989:SF6	SUPFAM:SSF101941	EnsemblPlantsGene:TraesCS5A01G519300	EnsemblPlants:TraesCS5A01G519300.1	SEG:seg

Description

No Description!

Coordinates

chr5A:-:680841188..680845093

Molecular Weight (calculated)

76561.2 Da

IEP (calculated)

6.189

GRAVY (calculated)

-0.556

Length

694 amino acids

Sequence
(BLAST)

001: MAPVSLPPGF RFHPTDEELI IYYLKSKING RQIELEIIPE VDLYKCEPWD LPEKSFLPSK DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS
101: QKRAVGMKKT LVYYRGRAPH GSRTDWVMHE YRLDERECEI DNGLQDAYAL CRIFKKTAPG PKIMEHYGAA QYHGEQPQWT PSSVERSPTP CDGRGGGDDF
201: ESSSFSFPTE APMTSGSMHG SGFGMQMMGS MPHEDGRWMQ FLSEDAFNAT NPYFMNPAAA SNFSCLPSKV DVALECARLQ HRLALPPLEV EDFPHDVSLD
301: TKTGILQSNP NEVDILQEFL SVASASQELI NGSGSSSSYP DMWLGAGTSS GGGHYMNELS SLVDLGAAKA KEEVDNFYHM CGIGASMMRR DDEPGRLVEI
401: SDMQEFKEEK KRPVENLRGV KLVNNDLGEI VVEGDESNPA EGITHYPIQD TAENSGEAGH HMTDHTTDEG GIDTGPIFSQ SQPDDFALAI GFDNDGDDNT
501: NPNASLDLYG KVDVQRGLFV SRVGAAKTFF HRVEPPKKVS FHLNPAASEV SKAIEKFHYL PVTSKVSGSG SSSSRVSVFG KVKALIRGKF PTMRRPPSPL
601: QHQRPETTVS ELLQIVSLLL APKEAVTERE EEMVSRKKVK PGRRGCDGGC SSSWQLGLPG KGSKGISSMF LSGKWAFLTS ALAAVRAPGP CNHF

Best Arabidopsis Sequence Match ( AT1G65910.1 )
(BLAST)

001: MAPVSMPPGF RFHPTDEELV IYYLKRKING RTIELEIIPE IDLYKCEPWD LPGKSLLPSK DLEWFFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVTS
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I

Arabidopsis Description

anac028NAC028 [Source:UniProtKB/TrEMBL;Acc:A0A178W7T7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.