Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G568000.1 | Wheat | nucleus | 78.54 | 76.55 |
| TraesCS2A01G561800.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 45.52 | 54.37 |
| TraesCS5A01G353500.1 | Wheat | nucleus | 22.41 | 43.78 |
| TraesCS5A01G220900.1 | Wheat | cytosol | 16.98 | 30.9 |
| TraesCS1A01G190100.1 | Wheat | nucleus | 20.99 | 26.57 |
| TraesCS6A01G003800.1 | Wheat | nucleus | 21.23 | 23.87 |
| TraesCS1A01G266300.2 | Wheat | nucleus | 21.7 | 21.45 |
| TraesCS3A01G176500.1 | Wheat | cytosol | 19.81 | 16.8 |
| TraesCS6A01G406700.1 | Wheat | cytosol, golgi, nucleus | 24.53 | 16.15 |
| TraesCS5A01G519300.1 | Wheat | cytosol, nucleus, peroxisome | 25.71 | 15.71 |
| TraesCS7A01G299600.3 | Wheat | nucleus | 20.99 | 12.7 |
| TraesCS5A01G271500.2 | Wheat | nucleus | 20.99 | 12.19 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G561700.1 | EnsemblPlantsGene:TraesCS2A01G561700 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF14 | PFAM:PF02365 | PFscan:PS51005 | SUPFAM:SSF101941 | MapMan:15.5.17 | : |
Description
No Description!
Coordinates
chr2A:-:763247901..763249720
Molecular Weight (calculated)
46653.9 Da
IEP (calculated)
4.625
GRAVY (calculated)
-0.513
Length
424 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYVTVPAAT AEMDGAFSHL RPGFRFHPTD QELVSFYLRR KVLGHGGCFI PEVDLYKLQP HHLPGKSFSP STSDPGAKVE WYLFAPRGRK YPTGLRMERA
101: TPRGFWKSTG KDRPVMHKGI VVGMKKTLVF HIGKAPSGTR TDWVMHEYRL HGHHIQDTYA LCRVFNKNMA SPSTNASGDV DTDEDLMQFV PGVINIGKDR
201: MEYVCGDADS GQDPKHFMLG GVKMDKVMME YGSCSTSPNM DLNKFMLGGG DSVQDVMQSM LDGIGTGKDP IQVQAEPDGA SMENDFMQSV LGGVGTDMDP
301: IHVVSESDAA NANKDLMQFA FGALGTYQNP IQIESEVDGV DTDEGEKQFL TDGDDTGNGE MQILADRANK DQEAMQPMTG GTSVDGDNSG HSWFTNYLAE
401: ENNSWTQSPF DDFLYTSDDM GMIP
101: TPRGFWKSTG KDRPVMHKGI VVGMKKTLVF HIGKAPSGTR TDWVMHEYRL HGHHIQDTYA LCRVFNKNMA SPSTNASGDV DTDEDLMQFV PGVINIGKDR
201: MEYVCGDADS GQDPKHFMLG GVKMDKVMME YGSCSTSPNM DLNKFMLGGG DSVQDVMQSM LDGIGTGKDP IQVQAEPDGA SMENDFMQSV LGGVGTDMDP
301: IHVVSESDAA NANKDLMQFA FGALGTYQNP IQIESEVDGV DTDEGEKQFL TDGDDTGNGE MQILADRANK DQEAMQPMTG GTSVDGDNSG HSWFTNYLAE
401: ENNSWTQSPF DDFLYTSDDM GMIP
001: MAPVSMPPGF RFHPTDEELV IYYLKRKING RTIELEIIPE IDLYKCEPWD LPGKSLLPSK DLEWFFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVTS
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I
Arabidopsis Description
anac028NAC028 [Source:UniProtKB/TrEMBL;Acc:A0A178W7T7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.