Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039745.1-P | Field mustard | nucleus | 93.41 | 98.72 |
| CDY16427 | Canola | nucleus | 96.71 | 93.78 |
| PGSC0003DMT400018364 | Potato | mitochondrion, nucleus | 14.73 | 73.28 |
| AT1G65910.1 | Thale cress | nucleus | 76.08 | 69.57 |
| CDY71253 | Canola | cytosol | 18.89 | 61.24 |
| CDX92153 | Canola | nucleus | 22.36 | 57.08 |
| CDX95832 | Canola | nucleus | 22.36 | 57.08 |
| CDY70627 | Canola | cytosol | 15.94 | 55.76 |
| CDY41351 | Canola | plastid | 13.86 | 47.9 |
| GSMUA_Achr1P02820_001 | Banana | nucleus | 30.5 | 47.31 |
| GSMUA_Achr11P... | Banana | nucleus | 30.85 | 46.48 |
| GSMUA_AchrUn_... | Banana | nucleus | 28.42 | 46.2 |
| CDY10502 | Canola | nucleus | 23.4 | 43.97 |
| CDY42413 | Canola | nucleus | 23.05 | 43.04 |
| CDX67739 | Canola | nucleus | 23.05 | 42.77 |
| CDX90431 | Canola | nucleus | 20.97 | 42.31 |
| CDY01508 | Canola | nucleus | 20.8 | 41.96 |
| CDX77674 | Canola | nucleus | 20.62 | 41.9 |
| CDY59580 | Canola | nucleus | 21.32 | 41.84 |
| CDX78816 | Canola | nucleus | 20.97 | 41.44 |
| CDY44498 | Canola | nucleus | 20.97 | 41.44 |
| CDY63046 | Canola | nucleus | 20.8 | 41.38 |
| CDX87703 | Canola | nucleus | 20.97 | 41.16 |
| PGSC0003DMT400055322 | Potato | nucleus | 40.03 | 41.1 |
| Solyc02g036430.1.1 | Tomato | nucleus | 39.34 | 40.18 |
| VIT_04s0079g00280.t01 | Wine grape | cytosol, nucleus, plasma membrane | 46.45 | 40.12 |
| KRH17271 | Soybean | cytosol, nucleus, plasma membrane | 44.19 | 39.6 |
| CDY28745 | Canola | cytosol | 32.58 | 39.33 |
| CDY43143 | Canola | nucleus | 32.41 | 39.12 |
| KRH72917 | Soybean | cytosol, nucleus, plasma membrane | 43.5 | 39.04 |
| CDY16943 | Canola | nucleus | 33.62 | 39.03 |
| CDX78734 | Canola | cytosol | 33.1 | 38.98 |
| CDX70745 | Canola | cytosol | 33.1 | 38.66 |
| CDY49932 | Canola | nucleus | 31.72 | 38.2 |
| CDX84070 | Canola | nucleus | 18.72 | 38.16 |
| CDY66060 | Canola | nucleus | 18.72 | 37.76 |
| CDY67205 | Canola | nucleus | 18.72 | 37.76 |
| KRH30885 | Soybean | cytosol, nucleus, vacuole | 43.85 | 37.65 |
| KRG98003 | Soybean | cytosol, nucleus, plasma membrane | 43.85 | 37.32 |
| Os03t0119966-01 | Rice | nucleus | 39.17 | 34.77 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 32.93 | 34.17 |
| GSMUA_Achr8P13430_001 | Banana | nucleus | 35.88 | 34.1 |
| Zm00001d027395_P009 | Maize | nucleus | 38.82 | 33.73 |
| EER95621 | Sorghum | nucleus | 39.69 | 33.58 |
| Zm00001d048493_P004 | Maize | nucleus | 39.34 | 33.04 |
| CDX86970 | Canola | nucleus | 18.02 | 32.91 |
| TraesCS4B01G350600.1 | Wheat | cytosol, nucleus, peroxisome | 38.99 | 32.56 |
| CDY21216 | Canola | nucleus | 24.26 | 32.56 |
| TraesCS5A01G519300.1 | Wheat | cytosol, nucleus, peroxisome | 38.82 | 32.28 |
| TraesCS4D01G345300.1 | Wheat | cytosol, nucleus, peroxisome | 38.99 | 32.23 |
| HORVU4Hr1G085320.1 | Barley | cytosol, nucleus, peroxisome | 38.3 | 32.08 |
| CDY46459 | Canola | nucleus | 16.64 | 31.58 |
| CDY43785 | Canola | nucleus | 18.2 | 30.52 |
| CDX81124 | Canola | nucleus | 17.68 | 29.82 |
| CDX84485 | Canola | nucleus | 17.85 | 29.77 |
| CDY44793 | Canola | nucleus | 18.02 | 29.71 |
| CDY35676 | Canola | cytoskeleton, cytosol, nucleus | 16.46 | 27.7 |
| CDX71459 | Canola | cytosol, golgi, nucleus | 16.12 | 26.96 |
| CDY04487 | Canola | cytosol | 16.12 | 26.96 |
| CDY09128 | Canola | cytosol | 15.94 | 26.82 |
| CDX70995 | Canola | cytosol | 15.42 | 26.65 |
| CDY34714 | Canola | cytosol, golgi, nucleus | 15.6 | 26.63 |
| CDY20351 | Canola | cytosol, golgi, nucleus | 15.42 | 26.25 |
| CDX88803 | Canola | cytosol | 15.25 | 26.11 |
| CDX92368 | Canola | cytosol | 14.9 | 25.67 |
| CDX69911 | Canola | nucleus | 18.89 | 24.89 |
| CDY21575 | Canola | nucleus | 18.72 | 24.88 |
| CDX78356 | Canola | nucleus | 15.42 | 24.52 |
| CDY00208 | Canola | nucleus | 18.2 | 24.31 |
| CDY00676 | Canola | nucleus | 17.68 | 23.83 |
| CDX88115 | Canola | cytosol | 18.2 | 23.7 |
| CDY41354 | Canola | cytosol, nucleus, plastid | 22.01 | 23.65 |
| CDY41352 | Canola | nucleus | 17.16 | 23.52 |
| CDY00946 | Canola | nucleus | 18.2 | 23.28 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 20.8 | 23.26 |
| CDX80455 | Canola | nucleus | 18.37 | 23.25 |
| CDY44853 | Canola | cytosol, nucleus, vacuole | 22.53 | 23.21 |
| CDY19828 | Canola | nucleus | 17.85 | 23.15 |
| CDY41353 | Canola | nucleus | 17.68 | 23.13 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 20.8 | 23.12 |
| CDX70227 | Canola | cytosol, nucleus, vacuole | 22.18 | 23.1 |
| CDY08601 | Canola | nucleus, plastid | 18.2 | 23.08 |
| CDX69392 | Canola | nucleus | 16.81 | 22.66 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 21.66 | 22.48 |
| CDX73920 | Canola | nucleus | 17.33 | 22.37 |
| CDY11289 | Canola | cytosol, nucleus, vacuole | 21.84 | 22.26 |
| CDY08139 | Canola | nucleus | 17.85 | 22.2 |
| CDY05939 | Canola | nucleus | 17.68 | 22.03 |
| CDY00677 | Canola | nucleus | 16.98 | 22.02 |
| CDX73921 | Canola | cytosol, nucleus, plastid | 17.33 | 21.93 |
| CDY25752 | Canola | nucleus | 19.06 | 21.61 |
| CDY34716 | Canola | nucleus | 10.92 | 21.43 |
| CDX93723 | Canola | nucleus | 20.62 | 21.4 |
| CDX73305 | Canola | nucleus | 19.06 | 21.11 |
| CDY28401 | Canola | cytosol, nucleus, plastid | 19.24 | 20.33 |
| CDY48632 | Canola | cytosol, nucleus, plastid | 19.76 | 20.25 |
| Solyc02g081270.2.1 | Tomato | nucleus | 36.05 | 20.21 |
| CDY12515 | Canola | plastid | 18.89 | 20.0 |
| CDX91785 | Canola | nucleus | 18.54 | 19.85 |
| CDY28397 | Canola | nucleus | 19.06 | 19.03 |
| CDY70628 | Canola | golgi | 12.82 | 18.69 |
| CDX73304 | Canola | nucleus | 18.72 | 18.52 |
| CDY66161 | Canola | nucleus | 20.1 | 18.27 |
| CDY26922 | Canola | nucleus | 20.1 | 18.24 |
| CDX87118 | Canola | nucleus | 18.02 | 12.5 |
| CDX86969 | Canola | cytosol | 0.35 | 1.87 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078J450 | UniProt:A0A078J450 | EnsemblPlants:CDY60870 | ProteinID:CDY60870 |
| ProteinID:CDY60870.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00030157001 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF6 | SUPFAM:SSF101941 | UniParc:UPI0004EEFEB7 | SEG:seg | : |
Description
BnaCnng36980DBnaCnng36980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J450]
Coordinates
chrLK033924:+:23157..26817
Molecular Weight (calculated)
65731.9 Da
IEP (calculated)
6.476
GRAVY (calculated)
-0.657
Length
577 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPVSMPPGF RFHPTDEELV IYYLKRKING RTIELEIIPE IDLYKCEPWD LPDAVDSETN SEDRVKKLLI HPQLLFYKKV FSFWKSLLPS KDLEWFFFSP
101: RDRKYPNGSR TNRATKAGYW KATGKDRKVT SHLRTVGTKK TLVYYRGRAP HGSRTDWVMH EYRLEEQECD SKSGIQDAYA LCRVFKKSAL ANKLEEQHHG
201: MKRKKATTNS EQSTSSTCLY SDGMYENLEN SGYPVSPDHG LTQLGNISSS DMETIENKWS HFMSHDTSFN FPAQSQFCSQ YGTITYPPSK AEIAFECGRL
301: KNRMLPPAPP LHVEDLAHSE HLGTNVANDT DQMLSKIIAL AQASHEPHNS LGSWEFASAS GNFQGDVCYP GEKASGSWVE ANMKAVDMQA HDGRFKEERI
401: VENLRWVGVS NKELEKSFIE EHSTVVPIED IWSYRKDSHE HQDGEGVNNN GDVDDVYTLE FSENELNANN SDKINNNDHD ATSSPRFEMV NKVEVSHGLS
501: VTTRQVTNTC FQQIVPSQTV IVYINPTGTV NCGHEKKLTE EVHVVKQINP RIDSFVSKIL GPWRRFAYLL VSFISSY
101: RDRKYPNGSR TNRATKAGYW KATGKDRKVT SHLRTVGTKK TLVYYRGRAP HGSRTDWVMH EYRLEEQECD SKSGIQDAYA LCRVFKKSAL ANKLEEQHHG
201: MKRKKATTNS EQSTSSTCLY SDGMYENLEN SGYPVSPDHG LTQLGNISSS DMETIENKWS HFMSHDTSFN FPAQSQFCSQ YGTITYPPSK AEIAFECGRL
301: KNRMLPPAPP LHVEDLAHSE HLGTNVANDT DQMLSKIIAL AQASHEPHNS LGSWEFASAS GNFQGDVCYP GEKASGSWVE ANMKAVDMQA HDGRFKEERI
401: VENLRWVGVS NKELEKSFIE EHSTVVPIED IWSYRKDSHE HQDGEGVNNN GDVDDVYTLE FSENELNANN SDKINNNDHD ATSSPRFEMV NKVEVSHGLS
501: VTTRQVTNTC FQQIVPSQTV IVYINPTGTV NCGHEKKLTE EVHVVKQINP RIDSFVSKIL GPWRRFAYLL VSFISSY
001: MAPVSMPPGF RFHPTDEELV IYYLKRKING RTIELEIIPE IDLYKCEPWD LPGKSLLPSK DLEWFFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVTS
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I
Arabidopsis Description
anac028NAC028 [Source:UniProtKB/TrEMBL;Acc:A0A178W7T7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.