Factsheet for Zm00001d008308_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P03200_001	Banana	cytosol	27.91	56.34
KXG32209	Sorghum	endoplasmic reticulum, nucleus, peroxisome	57.44	47.68
Zm00001d040318_P001	Maize	cytosol, endoplasmic reticulum, nucleus	55.58	46.23
Zm00001d021423_P001	Maize	nucleus	22.33	44.04
Zm00001d021424_P001	Maize	nucleus	23.02	40.41
TraesCS3B01G208300.2	Wheat	cytosol	41.86	37.42
HORVU3Hr1G036380.1	Barley	cytosol	41.63	37.14
TraesCS3D01G183900.2	Wheat	cytosol	43.02	37.0
TraesCS3A01G176500.1	Wheat	cytosol	42.79	36.8
Os01t0261200-01	Rice	cytosol	40.23	35.38
Zm00001d047050_P001	Maize	cytosol, nucleus, plastid	20.23	27.97
Zm00001d030023_P001	Maize	cytosol, nucleus, plastid	21.16	26.53
GSMUA_Achr5P23620_001	Banana	nucleus	30.7	24.77
Zm00001d002945_P010	Maize	cytosol	20.23	21.32
Zm00001d010227_P003	Maize	nucleus	21.86	21.12
Zm00001d038227_P001	Maize	nucleus	22.09	21.02
Zm00001d027395_P009	Maize	nucleus	24.19	15.66
Zm00001d048493_P004	Maize	nucleus	24.42	15.28
Zm00001d049540_P002	Maize	cytosol	23.02	14.98
Zm00001d024543_P001	Maize	nucleus	22.79	14.76
Zm00001d049913_P001	Maize	plastid	21.63	14.58
Zm00001d031898_P001	Maize	plastid	21.63	13.92
Zm00001d051879_P001	Maize	nucleus	20.23	13.24

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	UniProt:A0A1D6FBS1	ProteinID:AQK89501.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365
PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF17	SUPFAM:SSF101941	UniParc:UPI000842AEEF	EnsemblPlantsGene:Zm00001d008308
EnsemblPlants:Zm00001d008308_P002	EnsemblPlants:Zm00001d008308_T002	SEG:seg	:	:	:

Description

NAC-transcription factor 97Putative NAC domain transcription factor superfamily protein

Coordinates

chr8:-:4801455..4804054

Molecular Weight (calculated)

47321.1 Da

IEP (calculated)

8.910

GRAVY (calculated)

-0.547

Length

430 amino acids

Sequence
(BLAST)

001: MARAPGVRTP ALSKRPSPAA PSRQRAVKNA GARSAPVASL PCWLWLLRPS HPIGLSPPLP SRSSQPSPDA SSPPGVQSLP VLTRSLDRTP PGGALPPCFS
101: GLLLAARRPA APSWWFRGAP VGRDRPCGHP ALSLRRGVPG SRGRLHSVCG IYCKMEVLRD MHLPPGFGFH PSDTELVSHY LKRKILGQKI EYDPIPEVDI
201: YKHEPWDLPA KCNLPIEDNK WHFFASRDRK YPTGSRSNRA TLAGYWKSTG KDRAIKLKKR TLGTKKTLVF HEGRPPSGRR TEWIMHEYYI DENECKVSPD
301: MKDAFVLCRV TKRSDWELDN EVGNRYPHLE QLDAAAASVA STVKPEDAVA TVICPEESNR AATPVGSDEL SNDVGQEPIT PDSSPPNGGK ELEVWLEELL
401: DPSPSFNLVA DTRSADVSLT DQYAESSVSF

Best Arabidopsis Sequence Match ( AT1G65910.1 )
(BLAST)

001: MAPVSMPPGF RFHPTDEELV IYYLKRKING RTIELEIIPE IDLYKCEPWD LPGKSLLPSK DLEWFFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVTS
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I

Arabidopsis Description

anac028NAC028 [Source:UniProtKB/TrEMBL;Acc:A0A178W7T7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.