Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G183900.2 | Wheat | cytosol | 97.92 | 94.2 |
| TraesCS3A01G176500.1 | Wheat | cytosol | 97.3 | 93.6 |
| HORVU3Hr1G036380.1 | Barley | cytosol | 92.1 | 91.91 |
| Os01t0261200-01 | Rice | cytosol | 58.0 | 57.06 |
| GSMUA_Achr6P03200_001 | Banana | cytosol | 25.16 | 56.81 |
| KXG32209 | Sorghum | endoplasmic reticulum, nucleus, peroxisome | 59.25 | 55.02 |
| Zm00001d040318_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 58.21 | 54.16 |
| TraesCS5B01G356100.1 | Wheat | nucleus | 19.96 | 44.24 |
| Zm00001d008308_P002 | Maize | plastid | 37.42 | 41.86 |
| TraesCS5B01G356000.1 | Wheat | nucleus | 20.37 | 37.84 |
| GSMUA_Achr5P23620_001 | Banana | nucleus | 38.05 | 34.33 |
| TraesCS6B01G033000.1 | Wheat | nucleus | 20.37 | 26.85 |
| TraesCS2B01G616900.1 | Wheat | nucleus | 22.45 | 26.6 |
| TraesCS1B01G192200.1 | Wheat | cytosol, nucleus, plastid | 19.75 | 26.03 |
| TraesCS1B01G277300.1 | Wheat | nucleus | 21.41 | 23.84 |
| TraesCS7B01G196900.1 | Wheat | nucleus | 24.95 | 18.66 |
| TraesCS4B01G350600.1 | Wheat | cytosol, nucleus, peroxisome | 24.95 | 17.37 |
| TraesCS7B01G187600.1 | Wheat | nucleus | 23.7 | 16.26 |
| TraesCS6B01G451300.1 | Wheat | nucleus | 18.09 | 13.57 |
| TraesCS5B01G271800.1 | Wheat | cytosol, golgi, peroxisome | 8.11 | 6.64 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF17 | SUPFAM:SSF101941 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3B01G208300 | EnsemblPlants:TraesCS3B01G208300.2 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:244383553..244386257
Molecular Weight (calculated)
53443.8 Da
IEP (calculated)
5.841
GRAVY (calculated)
-0.533
Length
481 amino acids
Sequence
(BLAST)
(BLAST)
001: METLRDMALP PGFGFHPKDT ELVAHYLKKK ILGQKIEYDI IPEVDIYKHE PWDLPAKCNV PTQDNKWHFF AARDRKYPNG ARSNRATVAG YWKSTGKDRA
101: IKVDKRTIGT KKTLVFHEGR PPTGKRTEWI MHEYYIDENE CQSCPDMKDA FVLCKVTKRI DWTSENGNEV GNNNPQPQQA NVAAILAVSV EQPDTAASSI
201: IGDELPSDAA TVAIPAHMTP DGNDDLKEWL EELLDTSFDP SANTAVDSVS AQLSPDEQNA ESLNIGAMAP KVELDYASPN QTVVDDIDFL LPDDIHSMLY
301: PGSDDFTSWQ QTYFTAADPF SLSNNFMDEF QMKELQLPLE NNGPNLYEPA DTGIVVRTRH GGTSAASVPP YKARLQQSLG RMVTSSSESI NQTIKFVDNN
401: GHLDLMTNVK HQKKHVRDIT CARQSDAEKC GSHNNQGFFR GVQRAFRGCS ATGLNILVAL CMVGVAAAIL HHGRHRGGIR L
101: IKVDKRTIGT KKTLVFHEGR PPTGKRTEWI MHEYYIDENE CQSCPDMKDA FVLCKVTKRI DWTSENGNEV GNNNPQPQQA NVAAILAVSV EQPDTAASSI
201: IGDELPSDAA TVAIPAHMTP DGNDDLKEWL EELLDTSFDP SANTAVDSVS AQLSPDEQNA ESLNIGAMAP KVELDYASPN QTVVDDIDFL LPDDIHSMLY
301: PGSDDFTSWQ QTYFTAADPF SLSNNFMDEF QMKELQLPLE NNGPNLYEPA DTGIVVRTRH GGTSAASVPP YKARLQQSLG RMVTSSSESI NQTIKFVDNN
401: GHLDLMTNVK HQKKHVRDIT CARQSDAEKC GSHNNQGFFR GVQRAFRGCS ATGLNILVAL CMVGVAAAIL HHGRHRGGIR L
001: MAPVSMPPGF RFHPTDEELV IYYLKRKING RTIELEIIPE IDLYKCEPWD LPGKSLLPSK DLEWFFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVTS
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I
Arabidopsis Description
anac028NAC028 [Source:UniProtKB/TrEMBL;Acc:A0A178W7T7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.