Factsheet for TraesCS5B01G356000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G360700.1	Wheat	nucleus	98.84	98.84
KXG36156	Sorghum	nucleus	82.63	87.35
Zm00001d021424_P001	Maize	nucleus	81.85	86.53
VIT_17s0053g00740.t01	Wine grape	nucleus	71.04	77.31
GSMUA_Achr3P13880_001	Banana	cytosol	71.04	76.67
HORVU5Hr1G087840.5	Barley	nucleus, plastid	98.07	76.51
CDX92153	Canola	nucleus	64.86	74.34
CDX95832	Canola	nucleus	64.86	74.34
PGSC0003DMT400079749	Potato	nucleus	69.11	71.6
Solyc03g098190.2.1	Tomato	nucleus	68.73	71.49
Bra022236.1-P	Field mustard	nucleus	67.18	71.02
TraesCS5B01G356100.1	Wheat	nucleus	59.07	70.51
AT3G17730.1	Thale cress	nucleus	66.8	70.33
KRH09473	Soybean	nucleus	68.73	67.42
KRH38928	Soybean	nucleus	68.73	67.17
Os09t0552800-00	Rice	nucleus	86.1	60.93
TraesCS1B01G192200.1	Wheat	cytosol, nucleus, plastid	40.54	28.77
TraesCS6B01G033000.1	Wheat	nucleus	31.66	22.47
TraesCS2B01G616900.1	Wheat	nucleus	34.75	22.17
TraesCS1B01G277300.1	Wheat	nucleus	36.68	21.99
TraesCS3B01G208300.2	Wheat	cytosol	37.84	20.37
TraesCS4B01G350600.1	Wheat	cytosol, nucleus, peroxisome	54.05	20.26
TraesCS7B01G196900.1	Wheat	nucleus	39.77	16.02
TraesCS7B01G187600.1	Wheat	nucleus	38.22	14.12
TraesCS6B01G451300.1	Wheat	nucleus	27.41	11.08
TraesCS5B01G271800.1	Wheat	cytosol, golgi, peroxisome	7.34	3.24

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR31989	PANTHER:PTHR31989:SF8	SUPFAM:SSF101941	EnsemblPlantsGene:TraesCS5B01G356000	EnsemblPlants:TraesCS5B01G356000.1	SEG:seg

Description

No Description!

Coordinates

chr5B:+:535699794..535701668

Molecular Weight (calculated)

28897.6 Da

IEP (calculated)

4.846

GRAVY (calculated)

-0.697

Length

259 amino acids

Sequence
(BLAST)

001: MAPVGLPPGF RFHPTDEELV NYYLKRKIHG LHIELDIIPE VDLYKCEPWD LAEKSFLPSR DPEWYFFGPR DRKYPNGFRT NRATRAGYWK STGKDRRVMT
101: QQHHGGGGAG GGARAIGMKK TLVYYRGRAP QGVRTDWVMH EYRLDDKDSE DTIAIQDTYA LCRVFKKNAI CAEVEELQEG QCSMALLEGA CQQLLAGSRT
201: TGQEYYQTPS PDVPAGSTSG GADADADDDA DKDDSWMQFI SEDAWCSSTA AEESTSCAG

Best Arabidopsis Sequence Match ( AT3G17730.1 )
(BLAST)

001: MAPVGLPPGF RFHPTDEELV NYYLKRKING QEIELDIIPE VDLYKCEPWD LAEKSFLPSR DPEWYFFGPR DRKYPNGFRT NRATRGGYWK STGKDRRVTS
101: QSRAIGMKKT LVYYKGRAPQ GIRTDWVMHE YRLDDKDCDD PSSLQDSYAL CRVFKKNGIC SELESERQLQ TGQCSFTTAS MEEINSNNNN NYNNDYETMS
201: PEVGVSSACV EEVVDDKDDS WMQFITDDAW DTSSNGAAMG HGQGVY

Arabidopsis Description

anac057NAC domain containing protein 57 [Source:UniProtKB/TrEMBL;Acc:Q9LSH5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.