Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G194200.2 | Wheat | cytosol, nucleus, plastid | 95.89 | 95.37 |
| TraesCS1A01G190100.1 | Wheat | nucleus | 87.12 | 94.93 |
| HORVU1Hr1G049840.3 | Barley | cytosol | 79.73 | 81.51 |
| Zm00001d030023_P001 | Maize | cytosol, nucleus, plastid | 55.89 | 59.48 |
| EER94455 | Sorghum | nucleus | 56.71 | 58.64 |
| Zm00001d047050_P001 | Maize | cytosol, nucleus, plastid | 49.86 | 58.52 |
| GSMUA_Achr3P18070_001 | Banana | nucleus | 33.97 | 50.0 |
| TraesCS5B01G356100.1 | Wheat | nucleus | 28.22 | 47.47 |
| GSMUA_Achr5P03360_001 | Banana | nucleus | 43.84 | 44.69 |
| CDX90431 | Canola | nucleus | 33.97 | 43.36 |
| Bra012626.1-P | Field mustard | nucleus | 33.7 | 43.01 |
| CDY01508 | Canola | nucleus | 33.7 | 43.01 |
| CDX84070 | Canola | nucleus | 32.88 | 42.4 |
| Bra035488.1-P | Field mustard | nucleus | 33.15 | 42.31 |
| CDX77674 | Canola | nucleus | 32.88 | 42.25 |
| AT1G32510.1 | Thale cress | nucleus | 32.6 | 42.05 |
| CDY66060 | Canola | nucleus | 32.88 | 41.96 |
| CDY67205 | Canola | nucleus | 32.88 | 41.96 |
| KRH04320 | Soybean | nucleus | 39.18 | 41.81 |
| AT4G17980.2 | Thale cress | nucleus | 33.15 | 41.44 |
| Bra025012.1-P | Field mustard | nucleus | 32.88 | 41.38 |
| CDY63046 | Canola | nucleus | 32.88 | 41.38 |
| KRH58218 | Soybean | nucleus | 38.63 | 40.87 |
| CDY44498 | Canola | nucleus | 32.6 | 40.75 |
| Bra013272.1-P | Field mustard | nucleus | 32.6 | 40.75 |
| CDX78816 | Canola | nucleus | 32.6 | 40.75 |
| TraesCS5B01G356000.1 | Wheat | nucleus | 28.77 | 40.54 |
| PGSC0003DMT400045129 | Potato | nucleus | 36.44 | 39.94 |
| CDY59580 | Canola | nucleus | 32.05 | 39.8 |
| Bra022046.1-P | Field mustard | nucleus | 32.05 | 39.8 |
| CDX87703 | Canola | nucleus | 31.78 | 39.46 |
| Solyc08g077110.2.1 | Tomato | nucleus | 36.71 | 39.41 |
| AT5G46590.1 | Thale cress | nucleus | 31.23 | 39.04 |
| VIT_02s0012g01040.t01 | Wine grape | nucleus | 38.08 | 38.08 |
| Solyc06g061080.2.1 | Tomato | nucleus | 35.07 | 37.98 |
| GSMUA_Achr5P18140_001 | Banana | nucleus | 38.9 | 37.97 |
| GSMUA_Achr11P... | Banana | nucleus | 40.55 | 37.37 |
| TraesCS6B01G033000.1 | Wheat | nucleus | 23.29 | 23.29 |
| TraesCSU01G163300.1 | Wheat | cytoskeleton, nucleus, peroxisome | 26.03 | 23.23 |
| TraesCSU01G168500.1 | Wheat | cytoskeleton, nucleus, peroxisome | 26.03 | 23.23 |
| TraesCSU01G215800.1 | Wheat | cytoskeleton, nucleus, peroxisome | 26.03 | 23.23 |
| TraesCS1B01G277300.1 | Wheat | nucleus | 27.12 | 22.92 |
| TraesCS2B01G616900.1 | Wheat | nucleus | 23.29 | 20.94 |
| TraesCS3B01G208300.2 | Wheat | cytosol | 26.03 | 19.75 |
| TraesCS4B01G350600.1 | Wheat | cytosol, nucleus, peroxisome | 34.79 | 18.38 |
| TraesCS7B01G196900.1 | Wheat | nucleus | 25.48 | 14.46 |
| TraesCS7B01G187600.1 | Wheat | nucleus | 27.4 | 14.27 |
| TraesCS6B01G451300.1 | Wheat | nucleus | 18.9 | 10.76 |
| TraesCS5B01G271800.1 | Wheat | cytosol, golgi, peroxisome | 5.75 | 3.58 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF51 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS1B01G192200 | EnsemblPlants:TraesCS1B01G192200.1 | SEG:seg |
Description
No Description!
Coordinates
chr1B:+:344001348..344003024
Molecular Weight (calculated)
39999.5 Da
IEP (calculated)
6.043
GRAVY (calculated)
-0.260
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTMTLPPGF RFHPTDDELV GYYLKRRVDN LKIELEVIPV IDLYKCEPWE LPEKSFLPKR DLEWFFFVPR DRKYPNGSRT NRATTTGYWK ATGKDRKVSC
101: DGGAVCGVRK TLVFYKGRAP GGERTDWVMH EYRLCQDLLH GASNFIGAYA LCRVIKRTEA GLLHGDAVAK AKPGHQQMTK VGSSSSLVTT DQQLSSLTPS
201: PPRLDIVGNA FQLHSSPSPL YGGEVMSGMG APLGFPQQDA AGTFFIDGDL AGAGETTQAH MPFFDDMGVV SDHELRWDTL PLCTNNTFSS TAGTCTALLH
301: ELDQFLNPPS PFARVLNAYA CPSAGAAELW NPAAPNAAAP MLCREASDDL AAFFSSLDEN NMVVY
101: DGGAVCGVRK TLVFYKGRAP GGERTDWVMH EYRLCQDLLH GASNFIGAYA LCRVIKRTEA GLLHGDAVAK AKPGHQQMTK VGSSSSLVTT DQQLSSLTPS
201: PPRLDIVGNA FQLHSSPSPL YGGEVMSGMG APLGFPQQDA AGTFFIDGDL AGAGETTQAH MPFFDDMGVV SDHELRWDTL PLCTNNTFSS TAGTCTALLH
301: ELDQFLNPPS PFARVLNAYA CPSAGAAELW NPAAPNAAAP MLCREASDDL AAFFSSLDEN NMVVY
001: MGSSCLPPGF RFHPTDEELI GYYLSRKIEG LEIELEVIPV IDLYKFDPWE LPGKSFLPNR DLEWFFFCPR DKKYANGSRT NRATKAGYWK ATGKDRKITC
101: KSSHVIAGYR KTLVFYEGRA PLGDRTNWFM HEYRLCDIDD HSQKSPNFKG AFALCRVVKK NELKKNSKSL KNKNEQDIGS CYSSLATSPC RDEASQIQSF
201: KPSSTTNDSS SIWISPDFIL DSSKDYPQIK EVASECFPNY HFPVTTANHH VEFPVSSCYF NVDQDIDQSM QTGYWTNYEN DQTGSFDYSN LF
101: KSSHVIAGYR KTLVFYEGRA PLGDRTNWFM HEYRLCDIDD HSQKSPNFKG AFALCRVVKK NELKKNSKSL KNKNEQDIGS CYSSLATSPC RDEASQIQSF
201: KPSSTTNDSS SIWISPDFIL DSSKDYPQIK EVASECFPNY HFPVTTANHH VEFPVSSCYF NVDQDIDQSM QTGYWTNYEN DQTGSFDYSN LF
Arabidopsis Description
anac071NAC domain containing protein 71 [Source:TAIR;Acc:AT4G17980]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.