Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400045129 | Potato | nucleus | 93.53 | 95.5 |
| Solyc06g061080.2.1 | Tomato | nucleus | 70.88 | 71.51 |
| KRH58218 | Soybean | nucleus | 60.29 | 59.42 |
| KRH04320 | Soybean | nucleus | 59.71 | 59.36 |
| CDX90431 | Canola | nucleus | 49.71 | 59.09 |
| Bra012626.1-P | Field mustard | nucleus | 49.41 | 58.74 |
| VIT_02s0012g01040.t01 | Wine grape | nucleus | 62.65 | 58.36 |
| CDY01508 | Canola | nucleus | 48.53 | 57.69 |
| AT4G17980.2 | Thale cress | nucleus | 47.65 | 55.48 |
| Bra013272.1-P | Field mustard | nucleus | 47.35 | 55.14 |
| CDX78816 | Canola | nucleus | 47.35 | 55.14 |
| CDY44498 | Canola | nucleus | 46.76 | 54.45 |
| CDX77674 | Canola | nucleus | 44.71 | 53.52 |
| CDY63046 | Canola | nucleus | 45.0 | 52.76 |
| Bra025012.1-P | Field mustard | nucleus | 44.71 | 52.41 |
| Bra022046.1-P | Field mustard | nucleus | 45.0 | 52.04 |
| CDY59580 | Canola | nucleus | 45.0 | 52.04 |
| CDX87703 | Canola | nucleus | 44.71 | 51.7 |
| AT5G46590.1 | Thale cress | nucleus | 43.82 | 51.03 |
| Solyc03g078120.2.1 | Tomato | cytosol | 22.35 | 50.67 |
| GSMUA_Achr3P18070_001 | Banana | nucleus | 36.76 | 50.4 |
| CDX84070 | Canola | nucleus | 41.18 | 49.47 |
| CDY67205 | Canola | nucleus | 41.18 | 48.95 |
| CDY66060 | Canola | nucleus | 41.18 | 48.95 |
| Bra035488.1-P | Field mustard | nucleus | 40.59 | 48.25 |
| AT1G32510.1 | Thale cress | nucleus | 40.0 | 48.06 |
| Solyc03g098190.2.1 | Tomato | nucleus | 32.94 | 44.98 |
| Zm00001d047050_P001 | Maize | cytosol, nucleus, plastid | 37.94 | 41.48 |
| EER94455 | Sorghum | nucleus | 41.47 | 39.94 |
| TraesCS1A01G190100.1 | Wheat | nucleus | 39.12 | 39.7 |
| Zm00001d030023_P001 | Maize | cytosol, nucleus, plastid | 40.0 | 39.65 |
| GSMUA_Achr11P... | Banana | nucleus | 45.29 | 38.89 |
| GSMUA_Achr5P03360_001 | Banana | nucleus | 40.29 | 38.27 |
| HORVU1Hr1G049840.3 | Barley | cytosol | 39.71 | 37.82 |
| GSMUA_Achr5P18140_001 | Banana | nucleus | 41.47 | 37.7 |
| TraesCS1B01G192200.1 | Wheat | cytosol, nucleus, plastid | 39.41 | 36.71 |
| TraesCS1D01G194200.2 | Wheat | cytosol, nucleus, plastid | 38.82 | 35.97 |
| Solyc05g055480.2.1 | Tomato | nucleus | 28.53 | 25.13 |
| Solyc02g036430.1.1 | Tomato | nucleus | 38.53 | 23.19 |
| TraesCSU01G168500.1 | Wheat | cytoskeleton, nucleus, peroxisome | 26.76 | 22.25 |
| TraesCSU01G163300.1 | Wheat | cytoskeleton, nucleus, peroxisome | 26.76 | 22.25 |
| TraesCSU01G215800.1 | Wheat | cytoskeleton, nucleus, peroxisome | 26.76 | 22.25 |
| Solyc11g008010.1.1 | Tomato | endoplasmic reticulum, plasma membrane | 30.29 | 22.15 |
| Solyc06g074170.2.1 | Tomato | nucleus | 26.18 | 21.76 |
| Solyc11g068750.1.1 | Tomato | nucleus, plasma membrane | 25.59 | 19.25 |
| Solyc11g008000.1.1 | Tomato | nucleus | 29.41 | 18.94 |
| Solyc12g056790.1.1 | Tomato | nucleus | 31.47 | 18.14 |
| Solyc05g055470.2.1 | Tomato | nucleus | 28.24 | 17.65 |
| Solyc04g072220.2.1 | Tomato | cytosol, nucleus, plastid | 30.59 | 17.36 |
| Solyc06g073050.2.1 | Tomato | nucleus | 26.76 | 15.29 |
| Solyc03g080090.2.1 | Tomato | nucleus | 26.18 | 14.15 |
| Solyc11g005920.1.1 | Tomato | nucleus | 27.94 | 13.83 |
| Solyc02g081270.2.1 | Tomato | nucleus | 39.41 | 13.02 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 |
| InterPro:IPR036093 | UniProt:K4CN71 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF51 | SUPFAM:SSF101941 | EnsemblPlantsGene:Solyc08g077110.2 | EnsemblPlants:Solyc08g077110.2.1 | UniParc:UPI000276C298 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr8:-:61034673..61036853
Molecular Weight (calculated)
38191.4 Da
IEP (calculated)
5.073
GRAVY (calculated)
-0.608
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGTSLPPGF RFHPTDEELV GYYLKRKTDG LEIELEVIPV IDLYKFDPWE LPEKSFLPKR DLEWFFFCPR DKKYPNGSRT NRATKSGYWK ATGKDRKVVC
101: HPAVVGYRKT LVFYRGRAPL GDRTDWVMHE YRLCDDVTQG TPSFQGPFAL CRVIKRNDVS LKTKDVGGVK QVGSSTSTTS GAFTLVNEPP NALSDETPTQ
201: SAYMSNDSNY STPIASPYQT TQFGDYESAI GANSANLWMS SAMILDSSKE CPQGQNVSNY CPQYDFSSMT PWQPSDQSEF TSNSTFPSFR GEVELSGDLS
301: SFGCMSPYSI HGSYVGLYGN EDMTYEVFNQ NDSNRNPNLF
101: HPAVVGYRKT LVFYRGRAPL GDRTDWVMHE YRLCDDVTQG TPSFQGPFAL CRVIKRNDVS LKTKDVGGVK QVGSSTSTTS GAFTLVNEPP NALSDETPTQ
201: SAYMSNDSNY STPIASPYQT TQFGDYESAI GANSANLWMS SAMILDSSKE CPQGQNVSNY CPQYDFSSMT PWQPSDQSEF TSNSTFPSFR GEVELSGDLS
301: SFGCMSPYSI HGSYVGLYGN EDMTYEVFNQ NDSNRNPNLF
001: MGSSCLPPGF RFHPTDEELI GYYLSRKIEG LEIELEVIPV IDLYKFDPWE LPGKSFLPNR DLEWFFFCPR DKKYANGSRT NRATKAGYWK ATGKDRKITC
101: KSSHVIAGYR KTLVFYEGRA PLGDRTNWFM HEYRLCDIDD HSQKSPNFKG AFALCRVVKK NELKKNSKSL KNKNEQDIGS CYSSLATSPC RDEASQIQSF
201: KPSSTTNDSS SIWISPDFIL DSSKDYPQIK EVASECFPNY HFPVTTANHH VEFPVSSCYF NVDQDIDQSM QTGYWTNYEN DQTGSFDYSN LF
101: KSSHVIAGYR KTLVFYEGRA PLGDRTNWFM HEYRLCDIDD HSQKSPNFKG AFALCRVVKK NELKKNSKSL KNKNEQDIGS CYSSLATSPC RDEASQIQSF
201: KPSSTTNDSS SIWISPDFIL DSSKDYPQIK EVASECFPNY HFPVTTANHH VEFPVSSCYF NVDQDIDQSM QTGYWTNYEN DQTGSFDYSN LF
Arabidopsis Description
anac071NAC domain containing protein 71 [Source:TAIR;Acc:AT4G17980]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.