Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012626.1-P | Field mustard | nucleus | 50.81 | 44.06 |
| CDX90431 | Canola | nucleus | 50.81 | 44.06 |
| CDX77674 | Canola | nucleus | 50.4 | 44.01 |
| CDY01508 | Canola | nucleus | 50.4 | 43.71 |
| Bra025012.1-P | Field mustard | nucleus | 50.4 | 43.1 |
| CDY63046 | Canola | nucleus | 49.6 | 42.41 |
| AT4G17980.2 | Thale cress | nucleus | 49.6 | 42.12 |
| AT1G32510.1 | Thale cress | nucleus | 47.98 | 42.05 |
| Bra035488.1-P | Field mustard | nucleus | 48.39 | 41.96 |
| GSMUA_Achr9P23940_001 | Banana | cytosol | 40.73 | 41.91 |
| CDX84070 | Canola | nucleus | 47.58 | 41.7 |
| CDY67205 | Canola | nucleus | 47.98 | 41.61 |
| CDY66060 | Canola | nucleus | 47.98 | 41.61 |
| Zm00001d047050_P001 | Maize | cytosol, nucleus, plastid | 52.02 | 41.48 |
| GSMUA_Achr11P... | Banana | cytosol | 31.45 | 41.27 |
| GSMUA_Achr3P13880_001 | Banana | cytosol | 39.92 | 41.25 |
| GSMUA_Achr5P03360_001 | Banana | nucleus | 58.87 | 40.78 |
| AT5G46590.1 | Thale cress | nucleus | 47.98 | 40.75 |
| CDY59580 | Canola | nucleus | 47.98 | 40.48 |
| Bra022046.1-P | Field mustard | nucleus | 47.98 | 40.48 |
| CDY44498 | Canola | nucleus | 47.58 | 40.41 |
| Bra013272.1-P | Field mustard | nucleus | 47.58 | 40.41 |
| CDX78816 | Canola | nucleus | 47.58 | 40.41 |
| CDX87703 | Canola | nucleus | 47.58 | 40.14 |
| KRH04320 | Soybean | nucleus | 55.24 | 40.06 |
| KRH58218 | Soybean | nucleus | 55.24 | 39.71 |
| PGSC0003DMT400045129 | Potato | nucleus | 50.81 | 37.84 |
| GSMUA_Achr6P03200_001 | Banana | cytosol | 31.85 | 37.09 |
| TraesCS1A01G190100.1 | Wheat | nucleus | 50.0 | 37.01 |
| VIT_02s0012g01040.t01 | Wine grape | nucleus | 54.44 | 36.99 |
| Solyc08g077110.2.1 | Tomato | nucleus | 50.4 | 36.76 |
| Zm00001d030023_P001 | Maize | cytosol, nucleus, plastid | 50.0 | 36.15 |
| EER94455 | Sorghum | nucleus | 50.81 | 35.69 |
| GSMUA_Achr5P18140_001 | Banana | nucleus | 53.23 | 35.29 |
| Solyc06g061080.2.1 | Tomato | nucleus | 47.58 | 35.01 |
| GSMUA_Achr10P... | Banana | nucleus | 35.89 | 34.63 |
| HORVU1Hr1G049840.3 | Barley | cytosol | 49.6 | 34.45 |
| GSMUA_Achr11P... | Banana | nucleus | 54.84 | 34.34 |
| TraesCS1D01G194200.2 | Wheat | cytosol, nucleus, plastid | 50.4 | 34.06 |
| TraesCS1B01G192200.1 | Wheat | cytosol, nucleus, plastid | 50.0 | 33.97 |
| GSMUA_Achr2P11810_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 33.06 | 28.28 |
| GSMUA_AchrUn_... | Banana | nucleus | 40.32 | 28.17 |
| GSMUA_Achr1P02820_001 | Banana | nucleus | 40.73 | 27.15 |
| GSMUA_Achr11P... | Banana | nucleus | 39.11 | 25.33 |
| GSMUA_Achr7P23330_001 | Banana | nucleus | 37.1 | 22.55 |
| TraesCSU01G215800.1 | Wheat | cytoskeleton, nucleus, peroxisome | 33.87 | 20.54 |
| TraesCSU01G168500.1 | Wheat | cytoskeleton, nucleus, peroxisome | 33.87 | 20.54 |
| TraesCSU01G163300.1 | Wheat | cytoskeleton, nucleus, peroxisome | 33.87 | 20.54 |
| GSMUA_Achr11P... | Banana | nucleus | 35.08 | 19.86 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 39.52 | 17.63 |
| GSMUA_Achr8P13430_001 | Banana | nucleus | 40.32 | 16.47 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.29 | 15.82 |
| GSMUA_Achr5P23620_001 | Banana | nucleus | 33.87 | 15.76 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.24 | 15.69 |
| GSMUA_Achr8P24280_001 | Banana | nucleus | 35.48 | 14.99 |
| GSMUA_Achr1P03560_001 | Banana | nucleus | 33.87 | 14.63 |
| GSMUA_Achr4P29170_001 | Banana | nucleus | 33.47 | 14.43 |
| GSMUA_Achr9P23580_001 | Banana | plastid | 34.27 | 14.33 |
| GSMUA_Achr9P20400_001 | Banana | nucleus, peroxisome, plastid | 30.65 | 12.67 |
| GSMUA_Achr2P04010_001 | Banana | plastid | 31.05 | 12.01 |
| GSMUA_AchrUn_... | Banana | extracellular, plasma membrane | 34.27 | 11.2 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr3G18070_001 |
| EnsemblPlants:GSMUA_Achr3P18070_001 | EnsemblPlants:GSMUA_Achr3T18070_001 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M0SFM3 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF51 | SUPFAM:SSF101941 |
| UniParc:UPI000294E7FE | : | : | : | : | : |
Description
NAC domain protein, IPR003441 [Source:GMGC_GENE;Acc:GSMUA_Achr3G18070_001]
Coordinates
chr3:-:19480404..19481634
Molecular Weight (calculated)
28445.0 Da
IEP (calculated)
8.693
GRAVY (calculated)
-0.348
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MNAMLLPPGF RFHPTDEELV GYYLKRKVEG LKIELEVIPV ISLYKFDPWE LPGNVFSLLV EWFFFCSWDR KYPNGSRTNR ATASGYWKAT GKDRKIACEP
101: SAFGLRKTLV FYLGRAPGGQ RTVWIMHEYR LCEDLFHGSS NFLGAFCLCR VIKRSGNWLK RSSNRQEEPK AEKYPSNMFD FNRKRNIDEI FNGTEESSSL
201: DLFDRSSGSS VINSPEIARW VEPDPIITVP SVPDASKVST ALLPLWVP
101: SAFGLRKTLV FYLGRAPGGQ RTVWIMHEYR LCEDLFHGSS NFLGAFCLCR VIKRSGNWLK RSSNRQEEPK AEKYPSNMFD FNRKRNIDEI FNGTEESSSL
201: DLFDRSSGSS VINSPEIARW VEPDPIITVP SVPDASKVST ALLPLWVP
001: MGSSCLPPGF RFHPTDEELI GYYLSRKIEG LEIELEVIPV IDLYKFDPWE LPGKSFLPNR DLEWFFFCPR DKKYANGSRT NRATKAGYWK ATGKDRKITC
101: KSSHVIAGYR KTLVFYEGRA PLGDRTNWFM HEYRLCDIDD HSQKSPNFKG AFALCRVVKK NELKKNSKSL KNKNEQDIGS CYSSLATSPC RDEASQIQSF
201: KPSSTTNDSS SIWISPDFIL DSSKDYPQIK EVASECFPNY HFPVTTANHH VEFPVSSCYF NVDQDIDQSM QTGYWTNYEN DQTGSFDYSN LF
101: KSSHVIAGYR KTLVFYEGRA PLGDRTNWFM HEYRLCDIDD HSQKSPNFKG AFALCRVVKK NELKKNSKSL KNKNEQDIGS CYSSLATSPC RDEASQIQSF
201: KPSSTTNDSS SIWISPDFIL DSSKDYPQIK EVASECFPNY HFPVTTANHH VEFPVSSCYF NVDQDIDQSM QTGYWTNYEN DQTGSFDYSN LF
Arabidopsis Description
anac071NAC domain containing protein 71 [Source:TAIR;Acc:AT4G17980]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.