Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr2P09220_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G49530.1 | GSMUA_Achr2P09220_001 | AT5G19570.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_15s0048g02310.t01 | Wine grape | cytosol | 42.33 | 48.48 |
| GSMUA_Achr3P13880_001 | Banana | cytosol | 47.09 | 37.08 |
| GSMUA_Achr9P23940_001 | Banana | cytosol | 45.5 | 35.68 |
| GSMUA_Achr6P03200_001 | Banana | cytosol | 39.68 | 35.21 |
| GSMUA_Achr2P11810_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 53.97 | 35.17 |
| GSMUA_Achr3P18070_001 | Banana | nucleus | 41.27 | 31.45 |
| GSMUA_Achr10P... | Banana | nucleus | 39.15 | 28.79 |
| VIT_15s0048g02290.t01 | Wine grape | nucleus | 42.33 | 24.92 |
| GSMUA_AchrUn_... | Banana | nucleus | 44.44 | 23.66 |
| GSMUA_Achr5P03360_001 | Banana | nucleus | 44.44 | 23.46 |
| GSMUA_Achr1P02820_001 | Banana | nucleus | 46.03 | 23.39 |
| GSMUA_Achr11P... | Banana | nucleus | 46.03 | 22.72 |
| VIT_15s0048g02320.t01 | Wine grape | nucleus | 42.33 | 22.66 |
| AT5G24590.2 | Thale cress | nucleus | 49.21 | 20.62 |
| CDY00208 | Canola | nucleus | 46.56 | 20.37 |
| Bra019599.1-P | Field mustard | nucleus | 46.56 | 20.37 |
| CDX88115 | Canola | cytosol | 47.09 | 20.09 |
| CDY05939 | Canola | nucleus | 49.21 | 20.09 |
| GSMUA_Achr5P18140_001 | Banana | nucleus | 39.68 | 20.05 |
| CDY19828 | Canola | nucleus | 46.56 | 19.78 |
| Bra036520.1-P | Field mustard | nucleus | 46.56 | 19.78 |
| Bra017980.1-P | Field mustard | nucleus | 48.15 | 19.65 |
| CDY08139 | Canola | nucleus | 48.15 | 19.61 |
| Bra009774.1-P | Field mustard | nucleus | 47.09 | 19.56 |
| CDX80455 | Canola | nucleus | 47.09 | 19.52 |
| Zm00001d049540_P002 | Maize | cytosol | 68.25 | 19.52 |
| GSMUA_Achr11P... | Banana | nucleus | 40.74 | 19.44 |
| GSMUA_Achr4P29170_001 | Banana | nucleus | 58.73 | 19.3 |
| OQU79937 | Sorghum | nucleus | 66.14 | 18.83 |
| Zm00001d024543_P001 | Maize | nucleus | 66.14 | 18.83 |
| AT3G49530.1 | Thale cress | nucleus | 46.03 | 18.55 |
| AT4G35580.2 | Thale cress | nucleus | 52.38 | 18.54 |
| TraesCS7D01G295100.1 | Wheat | nucleus | 65.61 | 17.84 |
| Os08t0157900-01 | Rice | nucleus, plasma membrane | 68.78 | 17.83 |
| TraesCS7B01G187600.1 | Wheat | nucleus | 65.61 | 17.69 |
| TraesCS7A01G299600.3 | Wheat | nucleus | 65.61 | 17.69 |
| GSMUA_Achr1P03560_001 | Banana | nucleus | 53.44 | 17.6 |
| HORVU7Hr1G070780.5 | Barley | nucleus | 65.08 | 17.47 |
| GSMUA_Achr7P23330_001 | Banana | nucleus | 37.57 | 17.4 |
| GSMUA_Achr11P... | Banana | nucleus | 40.21 | 17.35 |
| VIT_15s0048g02300.t01 | Wine grape | nucleus | 39.15 | 16.86 |
| GSMUA_AchrUn_... | Banana | extracellular, plasma membrane | 65.08 | 16.21 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 47.09 | 16.01 |
| VIT_02s0025g03020.t01 | Wine grape | nucleus | 52.91 | 15.82 |
| KRH72602 | Soybean | nucleus | 48.15 | 15.45 |
| CDY66161 | Canola | nucleus | 51.85 | 15.43 |
| KRH16970 | Soybean | nucleus | 48.15 | 15.42 |
| AT1G33060.2 | Thale cress | nucleus | 52.91 | 15.34 |
| Bra010193.1-P | Field mustard | nucleus | 51.32 | 15.25 |
| CDY26922 | Canola | nucleus | 51.32 | 15.25 |
| KRH53649 | Soybean | nucleus | 48.15 | 15.22 |
| VIT_15s0048g02270.t01 | Wine grape | nucleus | 50.26 | 15.13 |
| KRH64275 | Soybean | nucleus | 48.15 | 15.09 |
| GSMUA_Achr5P23620_001 | Banana | nucleus | 42.33 | 15.01 |
| GSMUA_AchrUn_... | Banana | nucleus | 44.97 | 14.94 |
| VIT_16s0098g00760.t01 | Wine grape | mitochondrion | 50.26 | 14.75 |
| VIT_15s0048g02280.t01 | Wine grape | golgi, nucleus, plasma membrane | 39.68 | 14.68 |
| GSMUA_Achr8P13430_001 | Banana | nucleus | 47.09 | 14.66 |
| GSMUA_Achr8P24280_001 | Banana | nucleus | 44.44 | 14.31 |
| Solyc06g073050.2.1 | Tomato | nucleus | 44.97 | 14.29 |
| Solyc03g080090.2.1 | Tomato | nucleus | 46.03 | 13.83 |
| PGSC0003DMT400001498 | Potato | nucleus | 46.56 | 13.79 |
| PGSC0003DMT400069511 | Potato | nucleus | 44.97 | 13.49 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.33 | 13.18 |
| GSMUA_Achr9P23580_001 | Banana | plastid | 38.62 | 12.31 |
| GSMUA_Achr9P20400_001 | Banana | nucleus, peroxisome, plastid | 35.45 | 11.17 |
| GSMUA_Achr2P04010_001 | Banana | plastid | 36.51 | 10.76 |
| CDX87118 | Canola | nucleus | 46.03 | 10.46 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr11G07800_001 |
| EnsemblPlants:GSMUA_Achr11P07800_001 | EnsemblPlants:GSMUA_Achr11T07800_001 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M0RQB0 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF102 | SUPFAM:SSF101941 |
| UniParc:UPI000294CE8E | SEG:seg | : | : | : | : |
Description
no apical meristem protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G07800_001]
Coordinates
chr11:-:6067013..6068045
Molecular Weight (calculated)
21909.2 Da
IEP (calculated)
10.171
GRAVY (calculated)
-0.498
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MIRPGKLPVG FRFHPTDEEL VSHYLRGKNT GRIKPHDDVI PEIDVCKCEP WDLPGKSLIE SDDPEWFFFA PRDRKYPNGL RSKRATEAGY WKATGKDRVI
101: RSKATAAAAA APIGMKKTLV FHRGRAPNGV RTNWIMHEYR TTEPEFEAGD QANWRRFKIH TSWAWKLLLF FSFSFVKSSI TFLIEFTFC
101: RSKATAAAAA APIGMKKTLV FHRGRAPNGV RTNWIMHEYR TTEPEFEAGD QANWRRFKIH TSWAWKLLLF FSFSFVKSSI TFLIEFTFC
001: MNQIKNKTLP EMTTEQALLS MEALPLGFRF RPTDEELINH YLRLKINGRD LEVRVIPEID VCKWEPWDLP GLSVIKTDDQ EWFFFCPRDR KYPSGHRSNR
101: ATDIGYWKAT GKDRTIKSKK MIIGMKKTLV FYRGRAPRGE RTNWIMHEYR ATDKELDGTG PGQNPYVLCR LFHKPSDSCD PAHCEEIEKV NFTPTTTTRC
201: SPDDTSSEMV QETATSGVHA LDRSDDTERC LSDKGNNDVK PDVSVINNTS VNHAETSRAK DRNLGKTLVE ENPLLRDVPT LHGPILSEKS YYPGQSSIGF
301: ATSHMDSMYS SDFGNCDYGL HFQDGASEQD ASLTDVLDEV FHNHNESSND RKDFVLPNMM HWPGNTRLLS TEYPFLKDSV AFVDGSAEVS GSQQFVPDIL
401: ASRWVSEQNV DSKEAVEILS STGSSRTLTP LHNNVFGQYA SSSYAAIDPF NYNVNQPEQS SFEQSHVDRN ISPSNIFEFK ARSRENQRDL DSVVDQGTAP
501: RRIRLQIEQP LTPVTNKKER DADNYEEEDE VQSAMSKVVE EEPANLSAQG TAQRRIRLQT RLRKPLITLN NTKRNSNGRE GEASHRKEKE DISSSSSWQK
601: QKKSLVQFSS VVIIVAVIVV LVEIWKESRD AKCSFLFHQL DSFKGMFT
101: ATDIGYWKAT GKDRTIKSKK MIIGMKKTLV FYRGRAPRGE RTNWIMHEYR ATDKELDGTG PGQNPYVLCR LFHKPSDSCD PAHCEEIEKV NFTPTTTTRC
201: SPDDTSSEMV QETATSGVHA LDRSDDTERC LSDKGNNDVK PDVSVINNTS VNHAETSRAK DRNLGKTLVE ENPLLRDVPT LHGPILSEKS YYPGQSSIGF
301: ATSHMDSMYS SDFGNCDYGL HFQDGASEQD ASLTDVLDEV FHNHNESSND RKDFVLPNMM HWPGNTRLLS TEYPFLKDSV AFVDGSAEVS GSQQFVPDIL
401: ASRWVSEQNV DSKEAVEILS STGSSRTLTP LHNNVFGQYA SSSYAAIDPF NYNVNQPEQS SFEQSHVDRN ISPSNIFEFK ARSRENQRDL DSVVDQGTAP
501: RRIRLQIEQP LTPVTNKKER DADNYEEEDE VQSAMSKVVE EEPANLSAQG TAQRRIRLQT RLRKPLITLN NTKRNSNGRE GEASHRKEKE DISSSSSWQK
601: QKKSLVQFSS VVIIVAVIVV LVEIWKESRD AKCSFLFHQL DSFKGMFT
Arabidopsis Description
NAC014NAC014 [Source:UniProtKB/TrEMBL;Acc:A0A178WRQ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.