Factsheet for VIT_15s0048g02310.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	48.48	42.33
VIT_15s0048g02290.t01	Wine grape	nucleus	81.21	41.74
VIT_15s0048g02320.t01	Wine grape	nucleus	75.15	35.13
VIT_17s0053g00740.t01	Wine grape	nucleus	46.06	31.93
GSMUA_Achr2P11810_001	Banana	cytosol, mitochondrion, nucleus, plastid	48.48	27.59
VIT_19s0085g00950.t01	Wine grape	nucleus	46.67	27.4
VIT_15s0048g02300.t01	Wine grape	nucleus	68.48	25.74
VIT_02s0012g01040.t01	Wine grape	nucleus	44.85	20.27
VIT_15s0048g02280.t01	Wine grape	golgi, nucleus, plasma membrane	56.36	18.2
VIT_06s0080g00970.t01	Wine grape	nucleus	42.42	18.04
VIT_15s0048g02270.t01	Wine grape	nucleus	68.48	17.99
VIT_13s0019g05230.t01	Wine grape	nucleus	43.03	16.44
GSMUA_Achr1P03560_001	Banana	nucleus	51.52	14.81
GSMUA_Achr4P29170_001	Banana	nucleus	50.91	14.61
VIT_02s0025g03020.t01	Wine grape	nucleus	54.55	14.24
VIT_18s0001g01820.t01	Wine grape	nucleus	46.67	13.46
VIT_13s0019g05240.t01	Wine grape	cytosol, nucleus, plastid	44.24	13.06
Zm00001d049540_P002	Maize	cytosol	52.12	13.01
OQU79937	Sorghum	nucleus	52.12	12.95
Zm00001d024543_P001	Maize	nucleus	51.52	12.8
VIT_16s0098g00760.t01	Wine grape	mitochondrion	49.09	12.58
VIT_04s0079g00280.t01	Wine grape	cytosol, nucleus, plasma membrane	49.09	12.13
TraesCS7D01G295100.1	Wheat	nucleus	50.3	11.94
TraesCS7B01G187600.1	Wheat	nucleus	50.3	11.84
TraesCS7A01G299600.3	Wheat	nucleus	50.3	11.84
HORVU7Hr1G070780.5	Barley	nucleus	50.3	11.79
Os08t0157900-01	Rice	nucleus, plasma membrane	51.52	11.66
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	52.73	11.46
VIT_04s0044g01220.t01	Wine grape	nucleus	35.76	10.54

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	ProteinID:CCB61318	ProteinID:CCB61318.1	UniProt:F6I301	EMBL:FN596739
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF57	SUPFAM:SSF101941
UniParc:UPI000210A832	ArrayExpress:VIT_15s0048g02310	EnsemblPlantsGene:VIT_15s0048g02310	EnsemblPlants:VIT_15s0048g02310.t01	:	:

Description

No Description!

Coordinates

chr15:+:16471043..16474509

Molecular Weight (calculated)

18730.2 Da

IEP (calculated)

6.532

GRAVY (calculated)

-0.460

Length

165 amino acids

Sequence
(BLAST)

001: MSGGGMIGRD LETLPVGFRF APTDEELVDK YLTWKILGMD SEVEIIPEVD VCKWEPWEIP GFSVIKTDDP EWFFFSLLDY KYSNGSRSNR ATNAGYWKPT
101: GQDRGIFSGT NKEVIGTKKT LVFYRGRGRG AIRTNWVIHE YHTNIASLPA NCNKDTAGRV VELRN

Best Arabidopsis Sequence Match ( AT1G33060.1 )
(BLAST)

001: MNQIKNKTLP EMTTEQALLS MEALPLGFRF RPTDEELINH YLRLKINGRD LEVRVIPEID VCKWEPWDLP GLSVIKTDDQ EWFFFCPRDR KYPSGHRSNR
101: ATDIGYWKAT GKDRTIKSKK MIIGMKKTLV FYRGRAPRGE RTNWIMHEYR ATDKELDGTG PGQNPYVLCR LFHKPSDSCD PAHCEEIEKV NFTPTTTTRC
201: SPDDTSSEMV QETATSGVHA LDRSDDTERC LSDKGNNDVK PDVSVINNTS VNHAETSRAK DRNLGKTLVE ENPLLRDVPT LHGPILSEKS YYPGQSSIGF
301: ATSHMDSMYS SDFGNCDYGL HFQDGASEQD ASLTDVLDEV FHNHNESSND RKDFVLPNMM HWPGNTRLLS TEYPFLKDSV AFVDGSAEVS GSQQFVPDIL
401: ASRWVSEQNV DSKEAVEILS STGSSRTLTP LHNNVFGQYA SSSYAAIDPF NYNVNQPEQS SFEQSHVDRN ISPSNIFEFK ARSRENQRDL DSVVDQGTAP
501: RRIRLQIEQP LTPVTNKKER DADNYEEEDE VQSAMSKVVE EEPANLSAQG TAQRRIRLQT RLRKPLITLN NTKRNSNGRE GEASHRKEKE DISSSSSWQK
601: QKKSLVQFSS VVIIVAVIVV LVEIWKESRD AKCSFLFHQL DSFKGMFT

Arabidopsis Description

NAC014NAC014 [Source:UniProtKB/TrEMBL;Acc:A0A178WRQ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.