Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d030023_P001 | Maize | cytosol, nucleus, plastid | 68.56 | 70.55 |
| Zm00001d047050_P001 | Maize | cytosol, nucleus, plastid | 58.36 | 66.24 |
| TraesCS1A01G190100.1 | Wheat | nucleus | 59.49 | 62.69 |
| TraesCS1B01G192200.1 | Wheat | cytosol, nucleus, plastid | 58.64 | 56.71 |
| TraesCS1D01G194200.2 | Wheat | cytosol, nucleus, plastid | 58.36 | 56.13 |
| HORVU1Hr1G049840.3 | Barley | cytosol | 56.37 | 55.74 |
| GSMUA_Achr3P18070_001 | Banana | nucleus | 35.69 | 50.81 |
| EER97157 | Sorghum | nucleus | 30.88 | 50.0 |
| GSMUA_Achr5P03360_001 | Banana | nucleus | 47.03 | 46.37 |
| KXG36156 | Sorghum | nucleus | 31.44 | 45.31 |
| CDX90431 | Canola | nucleus | 36.26 | 44.76 |
| CDY01508 | Canola | nucleus | 36.26 | 44.76 |
| Bra012626.1-P | Field mustard | nucleus | 35.98 | 44.41 |
| CDX77674 | Canola | nucleus | 35.69 | 44.37 |
| AT4G17980.2 | Thale cress | nucleus | 36.26 | 43.84 |
| CDX78816 | Canola | nucleus | 35.98 | 43.49 |
| Bra025012.1-P | Field mustard | nucleus | 35.69 | 43.45 |
| CDY44498 | Canola | nucleus | 35.69 | 43.15 |
| Bra013272.1-P | Field mustard | nucleus | 35.69 | 43.15 |
| CDY63046 | Canola | nucleus | 35.41 | 43.1 |
| AT1G32510.1 | Thale cress | nucleus | 34.28 | 42.76 |
| KRH04320 | Soybean | nucleus | 41.08 | 42.4 |
| CDY59580 | Canola | nucleus | 35.13 | 42.18 |
| Bra022046.1-P | Field mustard | nucleus | 35.13 | 42.18 |
| CDX84070 | Canola | nucleus | 33.71 | 42.05 |
| Bra035488.1-P | Field mustard | nucleus | 33.99 | 41.96 |
| AT5G46590.1 | Thale cress | nucleus | 34.56 | 41.78 |
| PGSC0003DMT400045129 | Potato | nucleus | 39.38 | 41.74 |
| CDY66060 | Canola | nucleus | 33.71 | 41.61 |
| CDY67205 | Canola | nucleus | 33.71 | 41.61 |
| CDX87703 | Canola | nucleus | 34.56 | 41.5 |
| Solyc08g077110.2.1 | Tomato | nucleus | 39.94 | 41.47 |
| KRH58218 | Soybean | nucleus | 40.51 | 41.45 |
| GSMUA_Achr5P18140_001 | Banana | nucleus | 42.49 | 40.11 |
| Solyc06g061080.2.1 | Tomato | nucleus | 37.68 | 39.47 |
| VIT_02s0012g01040.t01 | Wine grape | nucleus | 40.51 | 39.18 |
| GSMUA_Achr11P... | Banana | nucleus | 43.63 | 38.89 |
| TraesCSU01G163300.1 | Wheat | cytoskeleton, nucleus, peroxisome | 26.63 | 22.98 |
| TraesCSU01G168500.1 | Wheat | cytoskeleton, nucleus, peroxisome | 26.63 | 22.98 |
| TraesCSU01G215800.1 | Wheat | cytoskeleton, nucleus, peroxisome | 26.63 | 22.98 |
| KXG22035 | Sorghum | nucleus | 27.76 | 22.07 |
| OQU82661 | Sorghum | nucleus | 24.93 | 21.73 |
| EER95621 | Sorghum | nucleus | 35.13 | 18.18 |
| KXG32209 | Sorghum | endoplasmic reticulum, nucleus, peroxisome | 26.63 | 18.15 |
| OQU79937 | Sorghum | nucleus | 28.33 | 15.06 |
| OQU80699 | Sorghum | plastid | 27.76 | 14.63 |
| EES06041 | Sorghum | nucleus | 25.78 | 13.96 |
| KXG35937 | Sorghum | nucleus | 26.06 | 12.98 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:8055613 | UniProt:C5WRD2 | EnsemblPlants:EER94455 | ProteinID:EER94455 |
| ProteinID:EER94455.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 |
| InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF51 |
| EnsemblPlantsGene:SORBI_3001G290400 | SUPFAM:SSF101941 | UniParc:UPI0001A82EB5 | RefSeq:XP_002467457.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr1:-:56734176..56737254
Molecular Weight (calculated)
38410.1 Da
IEP (calculated)
6.712
GRAVY (calculated)
-0.334
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTMTLPPGF RFHPTDDELV GYYLKRKVDN LKIELEVIPV IDLYKSEPWE LPEKSFLPKR DLEWFFFCPR DRKYPNGSRT NRATTTGYWK ATGKDRRIAC
101: DGGVYGLRKT LVFYRGRAPG GERTDWVMHE YRLCQDIAHG ACNFIGAYAL CRVIKRHELQ GGEPPAGSRA KGAAASSSSG SARGQMSKVS SSSSLVTSEQ
201: LSASFTPSNS NSPPPTLDVG MFQFQSPVGV GYAGVTATAT TGTGGLPWSP LPPPLLLSSS PHDTFFIGDD FPATAADESR SHAHLFGGDI MGLGSISEHE
301: LKWDSFPNTF SSGADTWNTA AVAASPTMLC RQASDGIEDL AAIFFPDDNR IVF
101: DGGVYGLRKT LVFYRGRAPG GERTDWVMHE YRLCQDIAHG ACNFIGAYAL CRVIKRHELQ GGEPPAGSRA KGAAASSSSG SARGQMSKVS SSSSLVTSEQ
201: LSASFTPSNS NSPPPTLDVG MFQFQSPVGV GYAGVTATAT TGTGGLPWSP LPPPLLLSSS PHDTFFIGDD FPATAADESR SHAHLFGGDI MGLGSISEHE
301: LKWDSFPNTF SSGADTWNTA AVAASPTMLC RQASDGIEDL AAIFFPDDNR IVF
001: MGSSCLPPGF RFHPTDEELI GYYLSRKIEG LEIELEVIPV IDLYKFDPWE LPGKSFLPNR DLEWFFFCPR DKKYANGSRT NRATKAGYWK ATGKDRKITC
101: KSSHVIAGYR KTLVFYEGRA PLGDRTNWFM HEYRLCDIDD HSQKSPNFKG AFALCRVVKK NELKKNSKSL KNKNEQDIGS CYSSLATSPC RDEASQIQSF
201: KPSSTTNDSS SIWISPDFIL DSSKDYPQIK EVASECFPNY HFPVTTANHH VEFPVSSCYF NVDQDIDQSM QTGYWTNYEN DQTGSFDYSN LF
101: KSSHVIAGYR KTLVFYEGRA PLGDRTNWFM HEYRLCDIDD HSQKSPNFKG AFALCRVVKK NELKKNSKSL KNKNEQDIGS CYSSLATSPC RDEASQIQSF
201: KPSSTTNDSS SIWISPDFIL DSSKDYPQIK EVASECFPNY HFPVTTANHH VEFPVSSCYF NVDQDIDQSM QTGYWTNYEN DQTGSFDYSN LF
Arabidopsis Description
anac071NAC domain containing protein 71 [Source:TAIR;Acc:AT4G17980]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.