CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021423_P001	Maize	nucleus	95.87	95.87
TraesCS5D01G360800.1	Wheat	nucleus	84.86	85.25
TraesCS5B01G356100.1	Wheat	nucleus	84.86	85.25
TraesCS5A01G353500.1	Wheat	nucleus	84.86	85.25
HORVU5Hr1G087850.4	Barley	nucleus	84.4	74.8
VIT_17s0053g00740.t01	Wine grape	nucleus	72.02	65.97
GSMUA_Achr9P23940_001	Banana	cytosol	70.64	63.9
CDX92153	Canola	nucleus	65.14	62.83
CDX95832	Canola	nucleus	65.14	62.83
KXG36156	Sorghum	nucleus	69.27	61.63
Solyc03g098190.2.1	Tomato	nucleus	70.18	61.45
PGSC0003DMT400079749	Potato	nucleus	69.72	60.8
AT3G17730.1	Thale cress	nucleus	67.43	59.76
Bra022236.1-P	Field mustard	nucleus	66.06	58.78
KRH09473	Soybean	nucleus	68.35	56.44
KRH38928	Soybean	nucleus	67.89	55.85
EER94455	Sorghum	nucleus	50.0	30.88
OQU82661	Sorghum	nucleus	39.45	21.23
KXG22035	Sorghum	nucleus	42.66	20.95
EER95621	Sorghum	nucleus	60.09	19.21
KXG32209	Sorghum	endoplasmic reticulum, nucleus, peroxisome	44.5	18.73
OQU80699	Sorghum	plastid	46.79	15.22
OQU79937	Sorghum	nucleus	43.58	14.31
EES06041	Sorghum	nucleus	41.28	13.8
KXG35937	Sorghum	nucleus	38.07	11.71

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EntrezGene:8074180	UniProt:C5X7Q0	EnsemblPlants:EER97157	ProteinID:EER97157
ProteinID:EER97157.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093
InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF50
EnsemblPlantsGene:SORBI_3002G290900	SUPFAM:SSF101941	UniParc:UPI0001A83A7C	RefSeq:XP_002460636.1	:	:

Description

hypothetical protein

Coordinates

chr2:+:66920581..66923178

Molecular Weight (calculated)

25436.8 Da

IEP (calculated)

8.340

GRAVY (calculated)

-0.971

Length

218 amino acids

Sequence
(BLAST)

001: MAPADLPPGF RFHPTDEELV NYYLKRKVHG LSIELDIIPE VDLYKCEPWE LAEKSFLPSR DSEWYFFGPR DRKYPNGCRT NRATQAGYWK STGKDRRINY
101: QNRSIGMKKT LVYYKGRAPQ GLRTNWVMHE YRIEESECEN TMGIQDSYAL CRVFKKNVAL GEFQKQKQGE CSSSQANEKQ EQFTSVRDAG QSSGSNEHGK
201: DNTWMQFIAD DLWCNKTK

Best Arabidopsis Sequence Match ( AT3G17730.1 )
(BLAST)

001: MAPVGLPPGF RFHPTDEELV NYYLKRKING QEIELDIIPE VDLYKCEPWD LAEKSFLPSR DPEWYFFGPR DRKYPNGFRT NRATRGGYWK STGKDRRVTS
101: QSRAIGMKKT LVYYKGRAPQ GIRTDWVMHE YRLDDKDCDD PSSLQDSYAL CRVFKKNGIC SELESERQLQ TGQCSFTTAS MEEINSNNNN NYNNDYETMS
201: PEVGVSSACV EEVVDDKDDS WMQFITDDAW DTSSNGAAMG HGQGVY

Arabidopsis Description

anac057NAC domain containing protein 57 [Source:UniProtKB/TrEMBL;Acc:Q9LSH5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.