Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G086730.1 | Barley | nucleus | 100.0 | 73.03 |
| HORVU1Hr1G065570.2 | Barley | nucleus | 98.65 | 50.81 |
| HORVU2Hr1G045580.1 | Barley | nucleus | 53.15 | 33.71 |
| HORVU7Hr1G033990.1 | Barley | nucleus | 53.15 | 33.71 |
| HORVU0Hr1G000630.1 | Barley | nucleus | 24.32 | 20.3 |
| HORVU2Hr1G127510.1 | Barley | nucleus | 11.26 | 6.22 |
| HORVU2Hr1G127550.1 | Barley | nucleus | 11.26 | 6.22 |
| HORVU6Hr1G093050.4 | Barley | cytosol, golgi, nucleus | 9.46 | 3.28 |
| HORVU4Hr1G085320.1 | Barley | cytosol, nucleus, peroxisome | 8.56 | 2.76 |
| HORVU3Hr1G036380.1 | Barley | cytosol | 5.86 | 2.7 |
| HORVU7Hr1G060310.1 | Barley | nucleus | 7.66 | 2.63 |
| CDX69392 | Canola | nucleus | 4.95 | 2.57 |
| HORVU0Hr1G021100.1 | Barley | cytosol, plastid | 5.41 | 2.11 |
| HORVU1Hr1G049840.3 | Barley | cytosol | 3.15 | 1.96 |
| CDX86969 | Canola | cytosol | 0.9 | 1.87 |
| HORVU7Hr1G070780.5 | Barley | nucleus | 5.41 | 1.7 |
| CDX86970 | Canola | nucleus | 1.8 | 1.27 |
| HORVU5Hr1G074230.30 | Barley | nucleus, plastid | 2.25 | 0.66 |
| HORVU5Hr1G087840.5 | Barley | nucleus, plastid | 0.45 | 0.3 |
| HORVU5Hr1G087850.4 | Barley | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G086780.2 | EnsemblPlantsGene:HORVU5Hr1G086780 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF61 | UniParc:UPI000B4868EF | UniProt:A0A287S4P8 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:577242591..577250665
Molecular Weight (calculated)
24212.2 Da
IEP (calculated)
3.239
GRAVY (calculated)
-0.572
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: QEPFTPQQSV QFSEHVNICS NEDNNAPPEI DGIWLEELAM FLNDSPNHDI ALPENSGLPP MSELEAQAFE MNTAELYDQL AGLAQSGDMS NVNFPAGDVG
101: VTENDFQQSN SGFAMDDDYI ELDDLFAPGE TFSYDFSGET FSYDLTGGTF SYDLSVPNNQ FLQYPLDQST NGSHYGDGAT QSTFEASGSL PPMPSTFDDM
201: PSVSNKPANS NCLNPTMKDP FS
101: VTENDFQQSN SGFAMDDDYI ELDDLFAPGE TFSYDFSGET FSYDLTGGTF SYDLSVPNNQ FLQYPLDQST NGSHYGDGAT QSTFEASGSL PPMPSTFDDM
201: PSVSNKPANS NCLNPTMKDP FS
001: MAEEKIKKSL LAADDSDDEY SRGDTVSDQT ELSSILDKLS LEPKTEKKKL LVLSLSGLLL HRVHKKELRK KPKNRSPDAS CGPNLVYKRP FAEEFMKFCL
101: ERFEVGIWSS ACELVSSLNI LIVTGPRECT DSGYKTLENR YKPLFFKDLS KVFKCFKGFS ASNTIFIDDE PYKALRNPDN TGLFPMSYDA SNIKDNLLDP
201: EGELCSYLEG LAKSSDVQAY IKVHSFGRPM IDSSHPDWSF YSNVSKIVS
101: ERFEVGIWSS ACELVSSLNI LIVTGPRECT DSGYKTLENR YKPLFFKDLS KVFKCFKGFS ASNTIFIDDE PYKALRNPDN TGLFPMSYDA SNIKDNLLDP
201: EGELCSYLEG LAKSSDVQAY IKVHSFGRPM IDSSHPDWSF YSNVSKIVS
Arabidopsis Description
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SJQ4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.