Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
- nucleus 1
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G17972.1 | KRH56393 | AT4G26455.1 | 21798944 |
| AT2G17972.1 | KRH62532 | AT4G26455.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH08082 | Soybean | plastid | 79.1 | 78.21 |
| Bra039904.1-P | Field mustard | plastid | 42.37 | 44.91 |
| CDY38164 | Canola | plastid | 42.37 | 44.91 |
| PGSC0003DMT400009351 | Potato | plastid | 41.24 | 44.79 |
| Solyc02g083970.1.1 | Tomato | plastid | 40.68 | 44.72 |
| CDY56584 | Canola | plastid | 41.81 | 44.31 |
| AT2G17972.1 | Thale cress | plastid | 38.98 | 43.67 |
| VIT_04s0023g03290.t01 | Wine grape | plastid | 43.5 | 43.26 |
| TraesCS7A01G385700.1 | Wheat | mitochondrion | 39.55 | 36.46 |
| TraesCS7B01G288600.1 | Wheat | mitochondrion, plasma membrane, plastid | 39.55 | 36.46 |
| TraesCS7D01G382300.1 | Wheat | mitochondrion, plasma membrane, plastid | 38.98 | 35.94 |
| Os06t0715200-01 | Rice | plastid | 38.42 | 35.23 |
| Zm00001d014781_P001 | Maize | plastid | 36.16 | 34.97 |
| HORVU7Hr1G091580.1 | Barley | cytosol, peroxisome, plastid | 40.68 | 34.95 |
| EER88960 | Sorghum | plastid | 36.16 | 34.04 |
Protein Annotations
| EMBL:ACUP02000729 | EnsemblPlants:KRH69789 | EnsemblPlantsGene:GLYMA_02G048800 | EntrezGene:100782207 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | PANTHER:PTHR36347 | ProteinID:KRH69789 | ProteinID:KRH69789.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0002336F78 | UniProt:I1JCI0 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:4458411..4459296
Molecular Weight (calculated)
19985.6 Da
IEP (calculated)
10.459
GRAVY (calculated)
-0.546
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: METFSITGNS SSFIILTRPS TRHKPIFLPQ RHTFNPIRCT NTDNNNNSSS SSSSNTTNDD ANSVQVQAPT TTPTTPVEIS FRRRSRRQAK RLRENENSGM
101: QKARVETPPK KWEDMSLSEK AVELYVGEKG ALFWLNKFAY ASIFIMIGGW IAFRFVGPAF NLYQLDGPLL SPSDVFK
101: QKARVETPPK KWEDMSLSEK AVELYVGEKG ALFWLNKFAY ASIFIMIGGW IAFRFVGPAF NLYQLDGPLL SPSDVFK
001: MKSLHFLAPN STIINLKQQS YTKTKFQLHR SNRRTLSINC VNSGGDEEKI TQPLDGVEIR FKRGSRRKMR EEGSGEGGGQ SGKKKETVQK PWEEMTLNEK
101: ALELYVGEKG LLFWLNKLAY ASIYIVIGGW IFFRFVGPAF NLYQLDTPPL DPKNILKG
101: ALELYVGEKG LLFWLNKLAY ASIYIVIGGW IFFRFVGPAF NLYQLDTPPL DPKNILKG
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q8S8K0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.