Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039904.1-P | Field mustard | plastid | 74.05 | 70.06 |
| CDY38164 | Canola | plastid | 74.05 | 70.06 |
| CDY56584 | Canola | plastid | 74.05 | 70.06 |
| Solyc02g083970.1.1 | Tomato | plastid | 43.04 | 42.24 |
| PGSC0003DMT400009351 | Potato | plastid | 43.04 | 41.72 |
| KRH69789 | Soybean | plastid | 43.67 | 38.98 |
| VIT_04s0023g03290.t01 | Wine grape | plastid | 41.77 | 37.08 |
| KRH08082 | Soybean | plastid | 41.77 | 36.87 |
| Zm00001d014781_P001 | Maize | plastid | 39.24 | 33.88 |
| EER88960 | Sorghum | plastid | 39.24 | 32.98 |
| TraesCS7B01G288600.1 | Wheat | mitochondrion, plasma membrane, plastid | 39.87 | 32.81 |
| TraesCS7D01G382300.1 | Wheat | mitochondrion, plasma membrane, plastid | 39.87 | 32.81 |
| TraesCS7A01G385700.1 | Wheat | mitochondrion | 39.24 | 32.29 |
| HORVU7Hr1G091580.1 | Barley | cytosol, peroxisome, plastid | 39.24 | 30.1 |
| Os06t0715200-01 | Rice | plastid | 36.71 | 30.05 |
Protein Annotations
| MapMan:35.2 | EntrezGene:816308 | ProteinID:AAM15147.1 | ProteinID:AEC06709.1 | EMBL:AK118100 | ArrayExpress:AT2G17972 |
| EnsemblPlantsGene:AT2G17972 | RefSeq:AT2G17972 | TAIR:AT2G17972 | RefSeq:AT2G17972-TAIR-G | EnsemblPlants:AT2G17972.1 | TAIR:AT2G17972.1 |
| Unigene:At.40073 | EMBL:BT005480 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0016020 |
| GO:GO:0016021 | RefSeq:NP_565430.1 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR36347 | UniProt:Q8S8K0 | TMHMM:TMhelix |
| UniParc:UPI000000C672 | SEG:seg | : | : | : | : |
Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q8S8K0]
Coordinates
chr2:+:7821585..7822330
Molecular Weight (calculated)
18009.8 Da
IEP (calculated)
10.307
GRAVY (calculated)
-0.553
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSLHFLAPN STIINLKQQS YTKTKFQLHR SNRRTLSINC VNSGGDEEKI TQPLDGVEIR FKRGSRRKMR EEGSGEGGGQ SGKKKETVQK PWEEMTLNEK
101: ALELYVGEKG LLFWLNKLAY ASIYIVIGGW IFFRFVGPAF NLYQLDTPPL DPKNILKG
101: ALELYVGEKG LLFWLNKLAY ASIYIVIGGW IFFRFVGPAF NLYQLDTPPL DPKNILKG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.