Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 2
- plasma membrane 3
- endoplasmic reticulum 1
- vacuole 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH59308 | Soybean | plasma membrane | 77.64 | 82.11 |
| KRG99324 | Soybean | plasma membrane | 48.04 | 48.18 |
| CDY28472 | Canola | endoplasmic reticulum, extracellular | 13.9 | 30.87 |
| CDY47636 | Canola | mitochondrion, plasma membrane | 18.13 | 28.04 |
| AT1G23840.1 | Thale cress | plasma membrane | 27.49 | 26.92 |
| Bra024621.1-P | Field mustard | mitochondrion, plasma membrane | 17.22 | 26.89 |
| CDY59081 | Canola | mitochondrion, plasma membrane | 17.22 | 26.89 |
| AT1G23830.1 | Thale cress | plasma membrane | 27.79 | 26.67 |
| CDY47642 | Canola | cytosol, endoplasmic reticulum, vacuole | 11.18 | 26.24 |
| CDY47643 | Canola | mitochondrion, plasma membrane | 21.75 | 26.09 |
| CDY25804 | Canola | plasma membrane | 28.4 | 25.75 |
| AT1G23850.1 | Thale cress | plasma membrane | 26.89 | 25.14 |
| CDY28471 | Canola | extracellular | 12.08 | 24.24 |
| Bra012390.1-P | Field mustard | plasma membrane | 26.89 | 23.73 |
Protein Annotations
| EMBL:ACUP02004848 | EnsemblPlants:KRH43156 | EnsemblPlantsGene:GLYMA_08G134200 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR36714 | ProteinID:KRH43156 | ProteinID:KRH43156.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002961A00 |
| UniProt:I1KSZ6 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:10291947..10293304
Molecular Weight (calculated)
38226.5 Da
IEP (calculated)
8.102
GRAVY (calculated)
0.516
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MESESKQVKQ KLGVLDILKE AVTFYVSNIN FIIFTFLNSL PFFFVMLYFE ILFQQTIVET PEIFSLLPFN ERNHAYELDV IYDYGTNIPS RSFRKNYLPD
101: KSFSKDYLPV LILLGFIYLV PLHVLELCSA VVTMDSASKL YSEENNMSVM DMFKRSIDIS IMKGTFITSL YMLFWSTCLL IAFPWMAGNC YVLFRDLGYY
201: IFFAVICFLV FVKLLKVYLE WSAIWNMSFV ISVVDGIYGI GALRVSYYLS RGNQKRGLLV MLVFFALGLC LRLSCVSLGC YKGGYGIFVQ IGLLAVLNTL
301: KWLSCMIYFS DCKERKMQKK VDEESGKDLA K
101: KSFSKDYLPV LILLGFIYLV PLHVLELCSA VVTMDSASKL YSEENNMSVM DMFKRSIDIS IMKGTFITSL YMLFWSTCLL IAFPWMAGNC YVLFRDLGYY
201: IFFAVICFLV FVKLLKVYLE WSAIWNMSFV ISVVDGIYGI GALRVSYYLS RGNQKRGLLV MLVFFALGLC LRLSCVSLGC YKGGYGIFVQ IGLLAVLNTL
301: KWLSCMIYFS DCKERKMQKK VDEESGKDLA K
001: MKIEEDLGFI NILKRATKLL CGNINLVLFL FLCSLPLFCF LIFFELSLQT TVSLASQYLV RQLTNWDYYY VPQDASVLEN LIPLLIQTFL LYLFPYGLID
101: LFTTTTIVSA SWTVHTSEEE PLRFGQLVRR TVEICQNRLE GCLITSLYVL LLSTPVFFGF LFVATNYFHI ISLTGSGENS YYYSINIEED AEGYYRSSSV
201: NSPVKMLFDA VLAMFHGAIF LGLLAMFSKW SAGWNMGLVV SVLEEEENGQ SIYGTDALTL SSNYGKGHEK RGLQVMLVFL VFAIAMRMPC FCFKCTESSN
301: GNRVLYTSFY VGLICVGNMI KWVACVVFYE DCRTSVLEKK GDVEIGSKGK TFVA
101: LFTTTTIVSA SWTVHTSEEE PLRFGQLVRR TVEICQNRLE GCLITSLYVL LLSTPVFFGF LFVATNYFHI ISLTGSGENS YYYSINIEED AEGYYRSSSV
201: NSPVKMLFDA VLAMFHGAIF LGLLAMFSKW SAGWNMGLVV SVLEEEENGQ SIYGTDALTL SSNYGKGHEK RGLQVMLVFL VFAIAMRMPC FCFKCTESSN
301: GNRVLYTSFY VGLICVGNMI KWVACVVFYE DCRTSVLEKK GDVEIGSKGK TFVA
Arabidopsis Description
T23E23.1 [Source:UniProtKB/TrEMBL;Acc:Q9LRA9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.