Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 2
- plasma membrane 4
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH43156 | Soybean | extracellular, plasma membrane, vacuole | 48.18 | 48.04 |
| KRH59308 | Soybean | plasma membrane | 44.85 | 47.28 |
| CDY28472 | Canola | endoplasmic reticulum, extracellular | 14.85 | 32.89 |
| CDY47636 | Canola | mitochondrion, plasma membrane | 20.0 | 30.84 |
| Bra024621.1-P | Field mustard | mitochondrion, plasma membrane | 19.7 | 30.66 |
| CDY59081 | Canola | mitochondrion, plasma membrane | 19.7 | 30.66 |
| AT1G23830.1 | Thale cress | plasma membrane | 29.09 | 27.83 |
| AT1G23840.1 | Thale cress | plasma membrane | 28.48 | 27.81 |
| AT1G23850.1 | Thale cress | plasma membrane | 29.39 | 27.4 |
| CDY25804 | Canola | plasma membrane | 30.0 | 27.12 |
| CDY47642 | Canola | cytosol, endoplasmic reticulum, vacuole | 11.21 | 26.24 |
| Bra012390.1-P | Field mustard | plasma membrane | 29.39 | 25.87 |
| CDY28471 | Canola | extracellular | 11.82 | 23.64 |
| CDY47643 | Canola | mitochondrion, plasma membrane | 18.48 | 22.1 |
Protein Annotations
| EMBL:ACUP02011037 | EnsemblPlants:KRG99324 | EnsemblPlantsGene:GLYMA_18G137000 | EntrezGene:100786983 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | PANTHER:PTHR36714 | ProteinID:KRG99324 | ProteinID:KRG99324.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI00023DB1A0 | UniProt:I1N1F6 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr18:+:20115472..20116791
Molecular Weight (calculated)
38322.2 Da
IEP (calculated)
7.518
GRAVY (calculated)
0.326
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MESESNKSKQ KQKLEVSDIL WESVVIYFRN LNFIIFTFLT SIPLFCIMVY FEIFLQELLV ETSNIVNLPH ESHDDSIVFT DYDFIDYRNS YRPDLIIDRF
101: NKDYVLKLIL TGFIYMVPLY VLEFVSAIVT IALASKLHSK EKKMTLKEMV QKPFDLSKLR GSFVTSVYVL FLTTTHQLGL LFIVLNYHVY LKDSSFYLLF
201: AVICSAAFAK VLRMYLEWSA MWNMSLVMSV LEGIYGVDAL AVSAYFSRGC HRRGLFLMLI FFAWGHLLRL SCYHIGGYEQ GNAIFVQVGL YCMVNPLKWV
301: ACMIYVHDCK ERKLEKKADE ESGKDVKNGS
101: NKDYVLKLIL TGFIYMVPLY VLEFVSAIVT IALASKLHSK EKKMTLKEMV QKPFDLSKLR GSFVTSVYVL FLTTTHQLGL LFIVLNYHVY LKDSSFYLLF
201: AVICSAAFAK VLRMYLEWSA MWNMSLVMSV LEGIYGVDAL AVSAYFSRGC HRRGLFLMLI FFAWGHLLRL SCYHIGGYEQ GNAIFVQVGL YCMVNPLKWV
301: ACMIYVHDCK ERKLEKKADE ESGKDVKNGS
001: MKIEEDLGFI NILKRATKLL CGNINLVLFL FLCSLPLFCF LIFFELSLQT TVSLASQYLV RQLTNWDYYY VPQDASVLEN LIPLLIQTFL LYLFPYGLID
101: LFTTTTIVSA SWTVHTSEEE PLRFGQLVRR TVEICQNRLE GCLITSLYVL LLSTPVFFGF LFVATNYFHI ISLTGSGENS YYYSINIEED AEGYYRSSSV
201: NSPVKMLFDA VLAMFHGAIF LGLLAMFSKW SAGWNMGLVV SVLEEEENGQ SIYGTDALTL SSNYGKGHEK RGLQVMLVFL VFAIAMRMPC FCFKCTESSN
301: GNRVLYTSFY VGLICVGNMI KWVACVVFYE DCRTSVLEKK GDVEIGSKGK TFVA
101: LFTTTTIVSA SWTVHTSEEE PLRFGQLVRR TVEICQNRLE GCLITSLYVL LLSTPVFFGF LFVATNYFHI ISLTGSGENS YYYSINIEED AEGYYRSSSV
201: NSPVKMLFDA VLAMFHGAIF LGLLAMFSKW SAGWNMGLVV SVLEEEENGQ SIYGTDALTL SSNYGKGHEK RGLQVMLVFL VFAIAMRMPC FCFKCTESSN
301: GNRVLYTSFY VGLICVGNMI KWVACVVFYE DCRTSVLEKK GDVEIGSKGK TFVA
Arabidopsis Description
T23E23.1 [Source:UniProtKB/TrEMBL;Acc:Q9LRA9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.