Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 8
- golgi 4
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY25804 | Canola | plasma membrane | 94.67 | 97.26 |
AT1G23830.1 | Thale cress | plasma membrane | 57.33 | 62.32 |
AT1G23840.1 | Thale cress | plasma membrane | 55.2 | 61.24 |
Bra024621.1-P | Field mustard | mitochondrion, plasma membrane | 31.2 | 55.19 |
KRG99324 | Soybean | plasma membrane | 25.87 | 29.39 |
VIT_14s0066g01570.t01 | Wine grape | vacuole | 25.33 | 28.96 |
VIT_00s0809g00010.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 24.27 | 28.62 |
KRH43156 | Soybean | extracellular, plasma membrane, vacuole | 23.73 | 26.89 |
VIT_00s1217g00020.t01 | Wine grape | plasma membrane | 24.8 | 26.05 |
KRH59308 | Soybean | plasma membrane | 20.27 | 24.28 |
Protein Annotations
EnsemblPlants:Bra012390.1 | EnsemblPlants:Bra012390.1-P | EnsemblPlantsGene:Bra012390 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
PANTHER:PTHR36714 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000254139E | UniProt:M4D7D0 | MapMan:35.2 |
Description
AT1G23840 (E=7e-072) | unknown protein
Coordinates
chrA07:+:8045273..8046400
Molecular Weight (calculated)
43052.5 Da
IEP (calculated)
8.184
GRAVY (calculated)
0.475
Length
375 amino acids
Sequence
(BLAST)
(BLAST)
001: MKIDKKLSVV ELLKRAVKLL LSNINLALII FLCCLPLFCF LIFFELSLQT TLSFTYHFLS KQVNVGKDLP ENDLFLQTTT NYLTYQSLYQ QRNIWEDLSE
101: NDLIPWLIKT SLLYFFPYTI LDLLTTTMIV AASSTVYTSK EEPLGLIDLV DRSIKICRKR LGGCLVTTLY VLLLSTSVFL FFLPLCLLFF FGFFSHWADS
201: LNIVGLIHER QTFLDLVPFL IYAMVVLVQA TLFMYLTAKF IKWSAGWNMS LVVSVLEEGE DGEEGVYGSD ALSLAAWYRK GHETRDVWMM LMFLIFALTT
301: RMPCLYSKCS LSSNGNRMLY TGLYVGLICF GNVLKWLACV VRYHDCKARP LRKKADVEQA RPPATEIPPK VLVFK
101: NDLIPWLIKT SLLYFFPYTI LDLLTTTMIV AASSTVYTSK EEPLGLIDLV DRSIKICRKR LGGCLVTTLY VLLLSTSVFL FFLPLCLLFF FGFFSHWADS
201: LNIVGLIHER QTFLDLVPFL IYAMVVLVQA TLFMYLTAKF IKWSAGWNMS LVVSVLEEGE DGEEGVYGSD ALSLAAWYRK GHETRDVWMM LMFLIFALTT
301: RMPCLYSKCS LSSNGNRMLY TGLYVGLICF GNVLKWLACV VRYHDCKARP LRKKADVEQA RPPATEIPPK VLVFK
001: METKSEEKLS VIELLKRALK LLFGNINLAL FLFLCSLPLF CFLIFFELSL QTTVSLASTY ISKLVNSEED LSENDLLPWL IQTTLLYFFP YTILDLLTTT
101: TIVAASSIAY TSEEEPLGLL YLVGRSFKLC QNKVGGCLIT SLYVLLLSTS VFLGLFSGST IYLYFASLTL EQQIFFNQAV VQDQRFLEQA VVLLDVVVVL
201: IHGTVFIVLA AKFSKWSAGW NISMVVSVLE EEEDSKGIYG SSALSLSAWY LRGQEKRDFW MMLVFLVGAL VTRMPCLYYK CSESLSGNGV LYTGLYVSLI
301: CVGNVVKWVS CVVWYHDCNT RVLRKKGDVE IGSKAFAT
101: TIVAASSIAY TSEEEPLGLL YLVGRSFKLC QNKVGGCLIT SLYVLLLSTS VFLGLFSGST IYLYFASLTL EQQIFFNQAV VQDQRFLEQA VVLLDVVVVL
201: IHGTVFIVLA AKFSKWSAGW NISMVVSVLE EEEDSKGIYG SSALSLSAWY LRGQEKRDFW MMLVFLVGAL VTRMPCLYYK CSESLSGNGV LYTGLYVSLI
301: CVGNVVKWVS CVVWYHDCNT RVLRKKGDVE IGSKAFAT
Arabidopsis Description
At1g23840/F5O8_37 [Source:UniProtKB/TrEMBL;Acc:Q9ZUB1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.