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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 8
  • golgi 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY25804 Canola plasma membrane 94.67 97.26
AT1G23830.1 Thale cress plasma membrane 57.33 62.32
AT1G23840.1 Thale cress plasma membrane 55.2 61.24
Bra024621.1-P Field mustard mitochondrion, plasma membrane 31.2 55.19
KRG99324 Soybean plasma membrane 25.87 29.39
VIT_14s0066g01570.t01 Wine grape vacuole 25.33 28.96
VIT_00s0809g00010.t01 Wine grape endoplasmic reticulum, plasma membrane, vacuole 24.27 28.62
KRH43156 Soybean extracellular, plasma membrane, vacuole 23.73 26.89
VIT_00s1217g00020.t01 Wine grape plasma membrane 24.8 26.05
KRH59308 Soybean plasma membrane 20.27 24.28
Protein Annotations
EnsemblPlants:Bra012390.1EnsemblPlants:Bra012390.1-PEnsemblPlantsGene:Bra012390GO:GO:0005575GO:GO:0016020GO:GO:0016021
PANTHER:PTHR36714SEG:segTMHMM:TMhelixUniParc:UPI000254139EUniProt:M4D7D0MapMan:35.2
Description
AT1G23840 (E=7e-072) | unknown protein
Coordinates
chrA07:+:8045273..8046400
Molecular Weight (calculated)
43052.5 Da
IEP (calculated)
8.184
GRAVY (calculated)
0.475
Length
375 amino acids
Sequence
(BLAST)
001: MKIDKKLSVV ELLKRAVKLL LSNINLALII FLCCLPLFCF LIFFELSLQT TLSFTYHFLS KQVNVGKDLP ENDLFLQTTT NYLTYQSLYQ QRNIWEDLSE
101: NDLIPWLIKT SLLYFFPYTI LDLLTTTMIV AASSTVYTSK EEPLGLIDLV DRSIKICRKR LGGCLVTTLY VLLLSTSVFL FFLPLCLLFF FGFFSHWADS
201: LNIVGLIHER QTFLDLVPFL IYAMVVLVQA TLFMYLTAKF IKWSAGWNMS LVVSVLEEGE DGEEGVYGSD ALSLAAWYRK GHETRDVWMM LMFLIFALTT
301: RMPCLYSKCS LSSNGNRMLY TGLYVGLICF GNVLKWLACV VRYHDCKARP LRKKADVEQA RPPATEIPPK VLVFK
Best Arabidopsis Sequence Match ( AT1G23840.1 )
(BLAST)
001: METKSEEKLS VIELLKRALK LLFGNINLAL FLFLCSLPLF CFLIFFELSL QTTVSLASTY ISKLVNSEED LSENDLLPWL IQTTLLYFFP YTILDLLTTT
101: TIVAASSIAY TSEEEPLGLL YLVGRSFKLC QNKVGGCLIT SLYVLLLSTS VFLGLFSGST IYLYFASLTL EQQIFFNQAV VQDQRFLEQA VVLLDVVVVL
201: IHGTVFIVLA AKFSKWSAGW NISMVVSVLE EEEDSKGIYG SSALSLSAWY LRGQEKRDFW MMLVFLVGAL VTRMPCLYYK CSESLSGNGV LYTGLYVSLI
301: CVGNVVKWVS CVVWYHDCNT RVLRKKGDVE IGSKAFAT
Arabidopsis Description
At1g23840/F5O8_37 [Source:UniProtKB/TrEMBL;Acc:Q9ZUB1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.