Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY59081 | Canola | mitochondrion, plasma membrane | 100.0 | 100.0 |
| Bra012390.1-P | Field mustard | plasma membrane | 55.19 | 31.2 |
| VIT_14s0066g01570.t01 | Wine grape | vacuole | 33.02 | 21.34 |
| KRG99324 | Soybean | plasma membrane | 30.66 | 19.7 |
| VIT_00s0809g00010.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 29.25 | 19.5 |
| VIT_00s1217g00020.t01 | Wine grape | plasma membrane | 29.72 | 17.65 |
| KRH43156 | Soybean | extracellular, plasma membrane, vacuole | 26.89 | 17.22 |
| KRH59308 | Soybean | plasma membrane | 22.64 | 15.34 |
Protein Annotations
| EnsemblPlants:Bra024621.1 | EnsemblPlants:Bra024621.1-P | EnsemblPlantsGene:Bra024621 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR36714 | SEG:seg | TMHMM:TMhelix | UniParc:UPI00025421A9 | UniProt:M4E766 | MapMan:35.2 |
Description
AT1G23830 (E=1e-050) | unknown protein
Coordinates
chrA09:+:23988556..23989194
Molecular Weight (calculated)
23621.2 Da
IEP (calculated)
8.304
GRAVY (calculated)
0.577
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MVCLVQRSAK ICQNRLVGCL ITLLYVLLLS TSVFFGFFSD SVNYLFIASL SRDYESFHSK AAVLFHAVVY LIHGTIFIVL AVKFGKWSAV WNMGLVVSVL
101: EEEEGEDGKG CIYGTNALSL SYWYGRGHEK RDLLMMLMFL VFAIATRMPC LYSRCSLSGN GVLYTGVYVG LICVGNVVKW VACVVSYYDC RARVLEKKDD
201: VEIGSKAKGF AT
101: EEEEGEDGKG CIYGTNALSL SYWYGRGHEK RDLLMMLMFL VFAIATRMPC LYSRCSLSGN GVLYTGVYVG LICVGNVVKW VACVVSYYDC RARVLEKKDD
201: VEIGSKAKGF AT
001: METKSEEKLS VIELLKRALK LLFGNINLAL FLFLCSLPLF CFLIFFELSL QTTVSLASTY ISKLVNSEED LSENDLLPWL IQTTLLYFFP YTILDLLTTT
101: TIVAASSIAY TSEEEPLGLL YLVGRSFKLC QNKVGGCLIT SLYVLLLSTS VFLGLFSGST IYLYFASLTL EQQIFFNQAV VQDQRFLEQA VVLLDVVVVL
201: IHGTVFIVLA AKFSKWSAGW NISMVVSVLE EEEDSKGIYG SSALSLSAWY LRGQEKRDFW MMLVFLVGAL VTRMPCLYYK CSESLSGNGV LYTGLYVSLI
301: CVGNVVKWVS CVVWYHDCNT RVLRKKGDVE IGSKAFAT
101: TIVAASSIAY TSEEEPLGLL YLVGRSFKLC QNKVGGCLIT SLYVLLLSTS VFLGLFSGST IYLYFASLTL EQQIFFNQAV VQDQRFLEQA VVLLDVVVVL
201: IHGTVFIVLA AKFSKWSAGW NISMVVSVLE EEEDSKGIYG SSALSLSAWY LRGQEKRDFW MMLVFLVGAL VTRMPCLYYK CSESLSGNGV LYTGLYVSLI
301: CVGNVVKWVS CVVWYHDCNT RVLRKKGDVE IGSKAFAT
Arabidopsis Description
At1g23840/F5O8_37 [Source:UniProtKB/TrEMBL;Acc:Q9ZUB1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.