Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 4
- plasma membrane 6
- endoplasmic reticulum 4
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012390.1-P | Field mustard | plasma membrane | 97.26 | 94.67 |
| CDY28472 | Canola | endoplasmic reticulum, extracellular | 35.07 | 85.91 |
| CDY28471 | Canola | extracellular | 32.33 | 71.52 |
| CDY47642 | Canola | cytosol, endoplasmic reticulum, vacuole | 27.4 | 70.92 |
| AT1G23830.1 | Thale cress | plasma membrane | 60.27 | 63.77 |
| AT1G23840.1 | Thale cress | plasma membrane | 57.81 | 62.43 |
| CDY47636 | Canola | mitochondrion, plasma membrane | 34.52 | 58.88 |
| CDY59081 | Canola | mitochondrion, plasma membrane | 32.33 | 55.66 |
| CDY47643 | Canola | mitochondrion, plasma membrane | 36.44 | 48.19 |
| VIT_14s0066g01570.t01 | Wine grape | vacuole | 27.12 | 30.18 |
| KRG99324 | Soybean | plasma membrane | 27.12 | 30.0 |
| VIT_00s0809g00010.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 26.03 | 29.87 |
| KRH43156 | Soybean | extracellular, plasma membrane, vacuole | 25.75 | 28.4 |
| VIT_00s1217g00020.t01 | Wine grape | plasma membrane | 26.58 | 27.17 |
| KRH59308 | Soybean | plasma membrane | 21.92 | 25.56 |
Protein Annotations
| EnsemblPlants:CDY25804 | EnsemblPlantsGene:GSBRNA2T00033209001 | GO:A0A078GKL2 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR36714 | ProteinID:CDY25804 | ProteinID:CDY25804.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EDEE09 |
| UniProt:A0A078GKL2 | MapMan:35.2 | : | : | : | : |
Description
BnaA07g09780DBnaA07g09780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GKL2]
Coordinates
chrLK032180:-:372450..373547
Molecular Weight (calculated)
41804.9 Da
IEP (calculated)
8.021
GRAVY (calculated)
0.495
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MKIDKKLSVV ELLKRALKLL LSNINLALII FLCCLPLFCF LIFFELSLQT TLSFTYQFLS KQVNVGKDLP ENDLFLQTTT NYLTYQSLYK QRNIWEDLSE
101: NDLIPWLIKT SLLYFFPYTI LDLLTTTMIV AASSTVYTSK EEPLGLIDLV DRSIKICRKR LGGCLVTSLY VLLLSTSVFL FFLPLCLLFF FGFFSHWADS
201: LNIVGLIHER QTFLDLVPFL IYAMVVLVQA TLFMYLTAKF IKWSAGWNMS LVVSVLEEGE DGEEGVYGSD ALSLSAWYRK GHETRDVWMM LMFLIFALTT
301: RMPCLYLKCS LSSNGNGVLY TSLYVGLICF GNVLKWLACV VRYHDCKARP LRKKADVEQA KPPAT
101: NDLIPWLIKT SLLYFFPYTI LDLLTTTMIV AASSTVYTSK EEPLGLIDLV DRSIKICRKR LGGCLVTSLY VLLLSTSVFL FFLPLCLLFF FGFFSHWADS
201: LNIVGLIHER QTFLDLVPFL IYAMVVLVQA TLFMYLTAKF IKWSAGWNMS LVVSVLEEGE DGEEGVYGSD ALSLSAWYRK GHETRDVWMM LMFLIFALTT
301: RMPCLYLKCS LSSNGNGVLY TSLYVGLICF GNVLKWLACV VRYHDCKARP LRKKADVEQA KPPAT
001: METKSEEKLS VIELLKRALK LLFGNINLAL FLFLCSLPLF CFLIFFELSL QTTVSLASTY ISKLVNSEED LSENDLLPWL IQTTLLYFFP YTILDLLTTT
101: TIVAASSIAY TSEEEPLGLL YLVGRSFKLC QNKVGGCLIT SLYVLLLSTS VFLGLFSGST IYLYFASLTL EQQIFFNQAV VQDQRFLEQA VVLLDVVVVL
201: IHGTVFIVLA AKFSKWSAGW NISMVVSVLE EEEDSKGIYG SSALSLSAWY LRGQEKRDFW MMLVFLVGAL VTRMPCLYYK CSESLSGNGV LYTGLYVSLI
301: CVGNVVKWVS CVVWYHDCNT RVLRKKGDVE IGSKAFAT
101: TIVAASSIAY TSEEEPLGLL YLVGRSFKLC QNKVGGCLIT SLYVLLLSTS VFLGLFSGST IYLYFASLTL EQQIFFNQAV VQDQRFLEQA VVLLDVVVVL
201: IHGTVFIVLA AKFSKWSAGW NISMVVSVLE EEEDSKGIYG SSALSLSAWY LRGQEKRDFW MMLVFLVGAL VTRMPCLYYK CSESLSGNGV LYTGLYVSLI
301: CVGNVVKWVS CVVWYHDCNT RVLRKKGDVE IGSKAFAT
Arabidopsis Description
At1g23840/F5O8_37 [Source:UniProtKB/TrEMBL;Acc:Q9ZUB1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.