Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G36100.1 | KRH09922 | AT3G16310.1 | 21798944 |
| AT2G36100.1 | KRH23409 | AT3G16310.1 | 21798944 |
| AT2G36100.1 | KRH56393 | AT4G26455.1 | 21798944 |
| AT2G36100.1 | KRH62532 | AT4G26455.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH32783 | Soybean | cytosol, plasma membrane, vacuole | 95.38 | 94.9 |
| KRH32782 | Soybean | cytosol, plasma membrane, vacuole | 85.13 | 85.57 |
| KRH72260 | Soybean | plasma membrane | 85.13 | 85.57 |
| KRH72258 | Soybean | plasma membrane | 84.62 | 85.05 |
| KRH32784 | Soybean | plasma membrane | 84.62 | 84.62 |
| KRH72256 | Soybean | cytosol, plasma membrane, vacuole | 74.87 | 73.0 |
| KRH32785 | Soybean | cytosol, plasma membrane, vacuole | 67.18 | 65.5 |
| AT3G11550.1 | Thale cress | cytosol, plasma membrane, vacuole | 59.49 | 56.86 |
| CDY08514 | Canola | cytosol, plasma membrane, vacuole | 58.46 | 56.72 |
| Bra034831.1-P | Field mustard | cytosol, plasma membrane, vacuole | 57.95 | 56.22 |
| AT5G06200.1 | Thale cress | cytosol, plasma membrane, vacuole | 57.95 | 55.94 |
| CDX84158 | Canola | cytosol, plasma membrane, vacuole | 58.46 | 55.34 |
| CDX75070 | Canola | plasma membrane | 58.46 | 55.07 |
| Bra017259.1-P | Field mustard | plasma membrane | 56.92 | 54.95 |
| CDY43748 | Canola | cytosol, plasma membrane, vacuole | 56.92 | 54.95 |
| CDX73869 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 57.44 | 54.9 |
| CDY01034 | Canola | cytosol, plasma membrane, vacuole | 57.44 | 54.9 |
| Bra001409.1-P | Field mustard | cytosol, plasma membrane, vacuole | 56.92 | 54.41 |
| CDY62471 | Canola | cytosol, plasma membrane, vacuole | 56.92 | 54.41 |
| Bra041024.1-P | Field mustard | cytosol, plasma membrane, vacuole | 56.41 | 53.92 |
| Bra005299.1-P | Field mustard | peroxisome, plasma membrane, vacuole | 45.13 | 53.66 |
| Bra023049.1-P | Field mustard | cytosol, plasma membrane, vacuole | 56.41 | 53.4 |
| CDX84579 | Canola | cytosol, plasma membrane, vacuole | 56.41 | 53.4 |
| AT2G36100.1 | Thale cress | cytosol, plasma membrane, vacuole | 55.9 | 52.91 |
| CDX79653 | Canola | cytosol, plasma membrane, vacuole | 55.9 | 52.91 |
| CDX75071 | Canola | cytosol, plasma membrane, vacuole | 55.9 | 52.91 |
| KRH26660 | Soybean | cytosol, plasma membrane, plastid | 56.92 | 50.92 |
| CDX84159 | Canola | plasma membrane | 53.85 | 50.72 |
| KRH22659 | Soybean | cytosol, peroxisome, plasma membrane | 56.41 | 50.46 |
| CDY43749 | Canola | plasma membrane | 46.67 | 50.28 |
| Bra017260.1-P | Field mustard | plasma membrane | 46.15 | 49.72 |
| CDY00740 | Canola | plasma membrane | 38.46 | 46.01 |
| KRG89581 | Soybean | plasma membrane | 43.59 | 45.7 |
| KRG89579 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 43.08 | 45.16 |
| KRH70770 | Soybean | plasma membrane | 41.03 | 43.01 |
| KRG94419 | Soybean | cytosol, peroxisome, plasma membrane | 47.18 | 42.59 |
| KRH74901 | Soybean | cytosol, plasma membrane, vacuole | 19.49 | 41.76 |
| KRH74902 | Soybean | endoplasmic reticulum, extracellular | 13.33 | 37.14 |
| PGSC0003DMT400007419 | Potato | cytosol, plasma membrane, vacuole | 2.05 | 2.17 |
| Solyc04g005620.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 2.05 | 2.17 |
| PGSC0003DMT400047376 | Potato | cytosol, plasma membrane, vacuole | 2.05 | 2.16 |
| Solyc05g007790.2.1 | Tomato | plasma membrane | 2.05 | 2.16 |
Protein Annotations
| EntrezGene:100500661 | MapMan:35.1 | UniProt:A0A0R0L5W3 | EMBL:BT091606 | UniProt:C6T2E7 | InterPro:CASP/CASPL |
| InterPro:CASP_dom | EnsemblPlantsGene:GLYMA_02G201100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 |
| GO:GO:0051536 | GO:GO:0071555 | EnsemblPlants:KRH72259 | ProteinID:KRH72259 | ProteinID:KRH72259.1 | PFAM:PF04535 |
| PANTHER:PTHR11615 | PANTHER:PTHR11615:SF116 | TIGRFAMs:TIGR01569 | TMHMM:TMhelix | UniParc:UPI0001B1505B | SEG:seg |
Description
hypothetical protein
Coordinates
chr2:-:38497390..38499369
Molecular Weight (calculated)
20400.1 Da
IEP (calculated)
7.414
GRAVY (calculated)
0.878
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTTIEIPES SKVAKGKAVA VVAPARPGGW KKGVAIMDFI LRLGAIAAAL GAAATMGTSD QTLPFFTQFF QFEASYDSFT TFQFFVITMS LVGGYLVLSL
101: PFSIVAIVRP HAVGPRLFLI ILDTAFLTLA TAGGASAAAI VYLAHNGDQD TNWLAICNQF GDFCAQTSAA VVSSFVAVVV LVLLIIMSAL AIGKP
101: PFSIVAIVRP HAVGPRLFLI ILDTAFLTLA TAGGASAAAI VYLAHNGDQD TNWLAICNQF GDFCAQTSAA VVSSFVAVVV LVLLIIMSAL AIGKP
001: MKSDSIAVDV PAESSSVIKG KAPLLGLARD HTGSGGYKRG LSIFDFLLRL AAIVAALAAA ATMGTSDETL PFFTQFLQFE ASYDDLPTFQ FFVVAIAIVA
101: GYLVLSLPFS VVTIVRPLAV APRLLLLVLD TAALALDTAA ASAAAAIVYL AHNGNTNTNW LPICQQFGDF CQKTSGAVVS AFASVTFLAI LVVISGVSLK
201: RP
101: GYLVLSLPFS VVTIVRPLAV APRLLLLVLD TAALALDTAA ASAAAAIVYL AHNGNTNTNW LPICQQFGDF CQKTSGAVVS AFASVTFLAI LVVISGVSLK
201: RP
Arabidopsis Description
CASP4CASP-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178UFD9]
SUBAcon: [plasma membrane,vacuole,cytosol]
SUBAcon: [plasma membrane,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.