Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- golgi 1
- plasma membrane 2
- endoplasmic reticulum 1
- vacuole 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH70770 | Soybean | plasma membrane | 85.71 | 41.94 |
| KRG89579 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 64.84 | 31.72 |
| KRG89581 | Soybean | plasma membrane | 64.84 | 31.72 |
| KRH72260 | Soybean | plasma membrane | 42.86 | 20.1 |
| KRH32782 | Soybean | cytosol, plasma membrane, vacuole | 42.86 | 20.1 |
| KRH72258 | Soybean | plasma membrane | 41.76 | 19.59 |
| KRH72259 | Soybean | cytosol, plasma membrane, vacuole | 41.76 | 19.49 |
| KRH32783 | Soybean | cytosol, plasma membrane, vacuole | 41.76 | 19.39 |
| KRH32784 | Soybean | plasma membrane | 40.66 | 18.97 |
| KRH72256 | Soybean | cytosol, plasma membrane, vacuole | 39.56 | 18.0 |
| KRH32785 | Soybean | cytosol, plasma membrane, vacuole | 36.26 | 16.5 |
| Bra000515.1-P | Field mustard | plasma membrane | 38.46 | 15.84 |
| CDY31172 | Canola | plasma membrane | 38.46 | 15.84 |
| CDY30551 | Canola | plasma membrane | 38.46 | 15.84 |
| CDX83261 | Canola | plasma membrane | 38.46 | 15.84 |
| CDX77114 | Canola | plasma membrane | 38.46 | 15.84 |
| Bra034349.1-P | Field mustard | plasma membrane | 38.46 | 15.84 |
| AT2G27370.1 | Thale cress | cytosol, peroxisome, plasma membrane | 37.36 | 15.38 |
| KRG94419 | Soybean | cytosol, peroxisome, plasma membrane | 36.26 | 15.28 |
| KRH22659 | Soybean | cytosol, peroxisome, plasma membrane | 34.07 | 14.22 |
| KRH26660 | Soybean | cytosol, plasma membrane, plastid | 32.97 | 13.76 |
| KRH74902 | Soybean | endoplasmic reticulum, extracellular | 2.2 | 2.86 |
Protein Annotations
| MapMan:35.1 | UniProt:A0A0R0LE33 | EMBL:ACUP02000087 | InterPro:CASP/CASPL | InterPro:CASP_dom | EnsemblPlantsGene:GLYMA_01G050700 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlants:KRH74901 |
| ProteinID:KRH74901 | ProteinID:KRH74901.1 | PFAM:PF04535 | PANTHER:PTHR11615 | PANTHER:PTHR11615:SF81 | TIGRFAMs:TIGR01569 |
| TMHMM:TMhelix | UniParc:UPI0006EE120B | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:6026181..6027108
Molecular Weight (calculated)
9785.1 Da
IEP (calculated)
7.259
GRAVY (calculated)
0.665
Length
91 amino acids
Sequence
(BLAST)
(BLAST)
1: MKGVSIEVGE VSKDASQRKG VARGLSIMDF ILRIITAVAT LGSALAMGTT NETLPFATQF IKFRAEFDDL PSLVFFVMGN AVVCGILCFH L
001: MKSGQAEIME TSKGIQKSGL MSRRIAILEF ILRIVAFFNT IGSAILMGTT HETLPFFTQF IRFQAEYNDL PALTFFVVAN AVVSGYLILS LTLAFVHIVK
101: RKTQNTRILL IILDVAMLGL LTSGASSAAA IVYLAHNGNN KTNWFAICQQ FNSFCERISG SLIGSFIAIV LLILLILLSA IALSRRH
101: RKTQNTRILL IILDVAMLGL LTSGASSAAA IVYLAHNGNN KTNWFAICQQ FNSFCERISG SLIGSFIAIV LLILLILLSA IALSRRH
Arabidopsis Description
CASP5Casparian strip membrane protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXF3]
SUBAcon: [cytosol,plasma membrane,vacuole]
SUBAcon: [cytosol,plasma membrane,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.