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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
KRH09922
KRH23409
KRH56393
KRH62532

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G36100.1 KRH09922 AT3G16310.1 21798944
AT2G36100.1 KRH23409 AT3G16310.1 21798944
AT2G36100.1 KRH56393 AT4G26455.1 21798944
AT2G36100.1 KRH62532 AT4G26455.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH32784 Soybean plasma membrane 92.27 91.79
KRH72260 Soybean plasma membrane 91.24 91.24
KRH32782 Soybean cytosol, plasma membrane, vacuole 90.21 90.21
KRH32783 Soybean cytosol, plasma membrane, vacuole 85.57 84.69
KRH72259 Soybean cytosol, plasma membrane, vacuole 85.05 84.62
KRH72256 Soybean cytosol, plasma membrane, vacuole 81.44 79.0
KRH32785 Soybean cytosol, plasma membrane, vacuole 72.16 70.0
AT3G11550.1 Thale cress cytosol, plasma membrane, vacuole 64.95 61.76
CDY08514 Canola cytosol, plasma membrane, vacuole 61.86 59.7
CDX75070 Canola plasma membrane 63.4 59.42
AT5G06200.1 Thale cress cytosol, plasma membrane, vacuole 61.86 59.41
CDY62471 Canola cytosol, plasma membrane, vacuole 61.34 58.33
CDX84158 Canola cytosol, plasma membrane, vacuole 61.86 58.25
Bra017259.1-P Field mustard plasma membrane 60.31 57.92
CDY43748 Canola cytosol, plasma membrane, vacuole 60.31 57.92
Bra041024.1-P Field mustard cytosol, plasma membrane, vacuole 60.82 57.84
CDY01034 Canola cytosol, plasma membrane, vacuole 60.82 57.84
Bra034831.1-P Field mustard cytosol, plasma membrane, vacuole 59.79 57.71
CDX73869 Canola endoplasmic reticulum, plasma membrane, vacuole 59.79 56.86
Bra023049.1-P Field mustard cytosol, plasma membrane, vacuole 60.31 56.8
CDX84579 Canola cytosol, plasma membrane, vacuole 60.31 56.8
Bra001409.1-P Field mustard cytosol, plasma membrane, vacuole 59.28 56.37
CDX79653 Canola cytosol, plasma membrane, vacuole 59.79 56.31
CDX75071 Canola cytosol, plasma membrane, vacuole 59.79 56.31
Bra005299.1-P Field mustard peroxisome, plasma membrane, vacuole 46.91 55.49
AT2G36100.1 Thale cress cytosol, plasma membrane, vacuole 58.76 55.34
CDX84159 Canola plasma membrane 57.73 54.11
CDY43749 Canola plasma membrane 50.0 53.59
Bra017260.1-P Field mustard plasma membrane 49.48 53.04
KRH26660 Soybean cytosol, plasma membrane, plastid 57.73 51.38
KRH22659 Soybean cytosol, peroxisome, plasma membrane 57.22 50.92
CDY00740 Canola plasma membrane 37.11 44.17
KRH70770 Soybean plasma membrane 42.27 44.09
KRG94419 Soybean cytosol, peroxisome, plasma membrane 47.94 43.06
KRG89581 Soybean plasma membrane 40.72 42.47
KRG89579 Soybean endoplasmic reticulum, plasma membrane, vacuole 40.21 41.94
KRH74901 Soybean cytosol, plasma membrane, vacuole 19.59 41.76
KRH74902 Soybean endoplasmic reticulum, extracellular 14.95 41.43
PGSC0003DMT400007419 Potato cytosol, plasma membrane, vacuole 2.06 2.17
Solyc04g005620.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 2.06 2.17
PGSC0003DMT400047376 Potato cytosol, plasma membrane, vacuole 2.06 2.16
Solyc05g007790.2.1 Tomato plasma membrane 2.06 2.16
Protein Annotations
EntrezGene:100775765MapMan:35.1EMBL:ACUP02001197InterPro:CASP/CASPLInterPro:CASP_domEnsemblPlantsGene:GLYMA_02G201000
GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0016020
GO:GO:0016021GO:GO:0051536UniProt:I1JGL5EnsemblPlants:KRH72258ProteinID:KRH72258ProteinID:KRH72258.1
PFAM:PF04535PANTHER:PTHR11615PANTHER:PTHR11615:SF116TIGRFAMs:TIGR01569TMHMM:TMhelixUniParc:UPI000233745E
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr2:-:38477466..38479090
Molecular Weight (calculated)
20637.2 Da
IEP (calculated)
7.510
GRAVY (calculated)
0.817
Length
194 amino acids
Sequence
(BLAST)
001: MSTTIDVPES SNVAKEKVVL AAPSRSGGWK KGVAIMDFIL RLGAIAAALG AAATMGTSDQ TLPFFTQFFQ FEASYDSFTT FQFFVITMAL VAGYLVLSLP
101: FSIVAIIRPH AVGPRLFLII LDTVFLTLAT ASGASAAAIV YLAHNGNQDS NWLAICNQFG DFCAQTSGAV VSSFVSVVIF VLLIVMSALA LRRH
Best Arabidopsis Sequence Match ( AT2G36100.1 )
(BLAST)
001: MAKESTTIDV GEPSTVTKSS SHVVKDAKKK GFVAVASRGG AKRGLAIFDF LLRLAAIAVT IGAASVMYTA EETLPFFTQF LQFQAGYDDL PAFQYFVIAV
101: AVVASYLVLS LPFSIVSIVR PHAVAPRLIL LICDTLVVTL NTSAAAAAAS ITYLAHNGNQ STNWLPICQQ FGDFCQNVST AVVADSIAIL FFIVLIIISA
201: IALKRH
Arabidopsis Description
CASP1Casparian strip membrane protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIH4]
SUBAcon: [plasma membrane,vacuole,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.