Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G36100.1 | KRH09922 | AT3G16310.1 | 21798944 |
| AT2G36100.1 | KRH23409 | AT3G16310.1 | 21798944 |
| AT2G36100.1 | KRH56393 | AT4G26455.1 | 21798944 |
| AT2G36100.1 | KRH62532 | AT4G26455.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH72258 | Soybean | plasma membrane | 91.79 | 92.27 |
| KRH72260 | Soybean | plasma membrane | 86.67 | 87.11 |
| KRH32782 | Soybean | cytosol, plasma membrane, vacuole | 86.15 | 86.6 |
| KRH32783 | Soybean | cytosol, plasma membrane, vacuole | 85.64 | 85.2 |
| KRH72259 | Soybean | cytosol, plasma membrane, vacuole | 84.62 | 84.62 |
| KRH72256 | Soybean | cytosol, plasma membrane, vacuole | 78.46 | 76.5 |
| KRH32785 | Soybean | cytosol, plasma membrane, vacuole | 70.77 | 69.0 |
| AT3G11550.1 | Thale cress | cytosol, plasma membrane, vacuole | 62.56 | 59.8 |
| CDX75070 | Canola | plasma membrane | 61.54 | 57.97 |
| AT5G06200.1 | Thale cress | cytosol, plasma membrane, vacuole | 60.0 | 57.92 |
| CDX84158 | Canola | cytosol, plasma membrane, vacuole | 60.51 | 57.28 |
| CDY08514 | Canola | cytosol, plasma membrane, vacuole | 58.97 | 57.21 |
| Bra017259.1-P | Field mustard | plasma membrane | 58.97 | 56.93 |
| CDY43748 | Canola | cytosol, plasma membrane, vacuole | 58.97 | 56.93 |
| Bra034831.1-P | Field mustard | cytosol, plasma membrane, vacuole | 58.46 | 56.72 |
| CDY62471 | Canola | cytosol, plasma membrane, vacuole | 58.46 | 55.88 |
| CDY01034 | Canola | cytosol, plasma membrane, vacuole | 58.46 | 55.88 |
| Bra041024.1-P | Field mustard | cytosol, plasma membrane, vacuole | 57.95 | 55.39 |
| Bra023049.1-P | Field mustard | cytosol, plasma membrane, vacuole | 58.46 | 55.34 |
| CDX84579 | Canola | cytosol, plasma membrane, vacuole | 58.46 | 55.34 |
| CDX75071 | Canola | cytosol, plasma membrane, vacuole | 58.46 | 55.34 |
| CDX73869 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 57.44 | 54.9 |
| Bra005299.1-P | Field mustard | peroxisome, plasma membrane, vacuole | 46.15 | 54.88 |
| CDX79653 | Canola | cytosol, plasma membrane, vacuole | 57.95 | 54.85 |
| Bra001409.1-P | Field mustard | cytosol, plasma membrane, vacuole | 56.92 | 54.41 |
| AT2G36100.1 | Thale cress | cytosol, plasma membrane, vacuole | 56.41 | 53.4 |
| CDX84159 | Canola | plasma membrane | 56.41 | 53.14 |
| CDY43749 | Canola | plasma membrane | 48.72 | 52.49 |
| Bra017260.1-P | Field mustard | plasma membrane | 48.21 | 51.93 |
| KRH26660 | Soybean | cytosol, plasma membrane, plastid | 55.9 | 50.0 |
| KRH22659 | Soybean | cytosol, peroxisome, plasma membrane | 55.38 | 49.54 |
| KRH70770 | Soybean | plasma membrane | 42.05 | 44.09 |
| CDY00740 | Canola | plasma membrane | 36.41 | 43.56 |
| KRG94419 | Soybean | cytosol, peroxisome, plasma membrane | 47.69 | 43.06 |
| KRH74902 | Soybean | endoplasmic reticulum, extracellular | 14.87 | 41.43 |
| KRG89581 | Soybean | plasma membrane | 39.49 | 41.4 |
| KRG89579 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 38.97 | 40.86 |
| KRH74901 | Soybean | cytosol, plasma membrane, vacuole | 18.97 | 40.66 |
| PGSC0003DMT400007419 | Potato | cytosol, plasma membrane, vacuole | 2.05 | 2.17 |
| Solyc04g005620.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 2.05 | 2.17 |
| PGSC0003DMT400047376 | Potato | cytosol, plasma membrane, vacuole | 2.05 | 2.16 |
| Solyc05g007790.2.1 | Tomato | plasma membrane | 2.05 | 2.16 |
Protein Annotations
| MapMan:35.1 | EMBL:ACUP02006165 | InterPro:CASP/CASPL | InterPro:CASP_dom | EnsemblPlantsGene:GLYMA_10G075600 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0051536 | GO:GO:0071555 | UniProt:I1L9G0 |
| EnsemblPlants:KRH32784 | ProteinID:KRH32784 | ProteinID:KRH32784.1 | PFAM:PF04535 | PANTHER:PTHR11615 | PANTHER:PTHR11615:SF116 |
| TIGRFAMs:TIGR01569 | TMHMM:TMhelix | UniParc:UPI00023C8DB4 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr10:+:7835869..7837573
Molecular Weight (calculated)
20827.6 Da
IEP (calculated)
8.223
GRAVY (calculated)
0.798
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTTIDVPES NNVAKEKVLL LGARPRPGGW KKGVAIMDFI LRLGAIAAAL GAAATMGTSD QTLPFFTQFF QFEASYDSFT TFQFFVITMA LVAGYLVLSL
101: PFSIVVIIRP HAVGPRLFLI ILDTVFLTLA TASGASAAAI VYLAHNGNQD SNWLAICNQF GDFCAQTSGA VVSSLVSVVI FVLLIVMSAL ALRRN
101: PFSIVVIIRP HAVGPRLFLI ILDTVFLTLA TASGASAAAI VYLAHNGNQD SNWLAICNQF GDFCAQTSGA VVSSLVSVVI FVLLIVMSAL ALRRN
001: MKSDSIAVDV PAESSSVIKG KAPLLGLARD HTGSGGYKRG LSIFDFLLRL AAIVAALAAA ATMGTSDETL PFFTQFLQFE ASYDDLPTFQ FFVVAIAIVA
101: GYLVLSLPFS VVTIVRPLAV APRLLLLVLD TAALALDTAA ASAAAAIVYL AHNGNTNTNW LPICQQFGDF CQKTSGAVVS AFASVTFLAI LVVISGVSLK
201: RP
101: GYLVLSLPFS VVTIVRPLAV APRLLLLVLD TAALALDTAA ASAAAAIVYL AHNGNTNTNW LPICQQFGDF CQKTSGAVVS AFASVTFLAI LVVISGVSLK
201: RP
Arabidopsis Description
CASP4CASP-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178UFD9]
SUBAcon: [plasma membrane,vacuole,cytosol]
SUBAcon: [plasma membrane,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.