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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, plasma membrane, vacuole

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • cytosol 1
  • plasma membrane 3
  • extracellular 1
  • golgi 1
  • endoplasmic reticulum 1
  • vacuole 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane, vacuole
Any Predictor:cytosol, mitochondrion, nucleus, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
KRH09922
KRH23409
KRH56393
KRH62532

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G36100.1 KRH09922 AT3G16310.1 21798944
AT2G36100.1 KRH23409 AT3G16310.1 21798944
AT2G36100.1 KRH56393 AT4G26455.1 21798944
AT2G36100.1 KRH62532 AT4G26455.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH72259 Soybean cytosol, plasma membrane, vacuole 94.9 95.38
KRH32782 Soybean cytosol, plasma membrane, vacuole 85.2 86.08
KRH72260 Soybean plasma membrane 85.2 86.08
KRH32784 Soybean plasma membrane 85.2 85.64
KRH72258 Soybean plasma membrane 84.69 85.57
KRH72256 Soybean cytosol, plasma membrane, vacuole 74.49 73.0
KRH32785 Soybean cytosol, plasma membrane, vacuole 66.84 65.5
AT3G11550.1 Thale cress cytosol, plasma membrane, vacuole 59.18 56.86
CDX84158 Canola cytosol, plasma membrane, vacuole 59.69 56.8
CDX75070 Canola plasma membrane 59.69 56.52
Bra017259.1-P Field mustard plasma membrane 58.16 56.44
CDY43748 Canola cytosol, plasma membrane, vacuole 58.16 56.44
AT5G06200.1 Thale cress cytosol, plasma membrane, vacuole 58.16 56.44
Bra005299.1-P Field mustard peroxisome, plasma membrane, vacuole 46.43 55.49
CDY08514 Canola cytosol, plasma membrane, vacuole 56.63 55.22
CDX84579 Canola cytosol, plasma membrane, vacuole 57.65 54.85
Bra023049.1-P Field mustard cytosol, plasma membrane, vacuole 57.65 54.85
Bra034831.1-P Field mustard cytosol, plasma membrane, vacuole 56.12 54.73
CDX79653 Canola cytosol, plasma membrane, vacuole 57.14 54.37
CDX75071 Canola cytosol, plasma membrane, vacuole 57.14 54.37
AT2G36100.1 Thale cress cytosol, plasma membrane, vacuole 56.63 53.88
CDY01034 Canola cytosol, plasma membrane, vacuole 55.61 53.43
CDX73869 Canola endoplasmic reticulum, plasma membrane, vacuole 55.61 53.43
CDY62471 Canola cytosol, plasma membrane, vacuole 55.1 52.94
Bra001409.1-P Field mustard cytosol, plasma membrane, vacuole 55.1 52.94
Bra041024.1-P Field mustard cytosol, plasma membrane, vacuole 54.59 52.45
CDX84159 Canola plasma membrane 55.1 52.17
CDY43749 Canola plasma membrane 47.96 51.93
Bra017260.1-P Field mustard plasma membrane 47.45 51.38
KRH26660 Soybean cytosol, plasma membrane, plastid 56.63 50.92
KRH22659 Soybean cytosol, peroxisome, plasma membrane 56.12 50.46
CDY00740 Canola plasma membrane 36.73 44.17
KRG89581 Soybean plasma membrane 41.33 43.55
KRH70770 Soybean plasma membrane 40.82 43.01
KRG89579 Soybean endoplasmic reticulum, plasma membrane, vacuole 40.82 43.01
KRH74901 Soybean cytosol, plasma membrane, vacuole 19.39 41.76
KRG94419 Soybean cytosol, peroxisome, plasma membrane 45.92 41.67
KRH74902 Soybean endoplasmic reticulum, extracellular 13.27 37.14
PGSC0003DMT400007419 Potato cytosol, plasma membrane, vacuole 2.04 2.17
Solyc04g005620.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 2.04 2.17
PGSC0003DMT400047376 Potato cytosol, plasma membrane, vacuole 2.04 2.16
Solyc05g007790.2.1 Tomato plasma membrane 2.04 2.16
Protein Annotations
EntrezGene:100816413MapMan:35.1EMBL:ACUP02006165InterPro:CASP/CASPLInterPro:CASP_domEnsemblPlantsGene:GLYMA_10G075500
GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0016020
GO:GO:0016021GO:GO:0051536UniProt:I1L9F9EnsemblPlants:KRH32783ProteinID:KRH32783ProteinID:KRH32783.1
PFAM:PF04535PANTHER:PTHR11615PANTHER:PTHR11615:SF116TIGRFAMs:TIGR01569TMHMM:TMhelixUniParc:UPI000233D37F
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr10:+:7821786..7824899
Molecular Weight (calculated)
20433.2 Da
IEP (calculated)
7.414
GRAVY (calculated)
0.880
Length
196 amino acids
Sequence
(BLAST)
001: MSTTIEIPES STKVAKGKGV VVVAPARPGG WKKGVAIMDF ILRLGAIAAA LGAAATMGTS DQTLPFFTQF FQFEASYDSF TTFQFFVITM ALVGGYLVLS
101: LPFSIVAIVR PHAVGPRLSL IILDTVFLTL ATAGGASAAA IVYLAHNGDQ DTNWLAICNQ FGDFCAQTSA AVVSSLVAVL VLVLLIVMSA LAIGKP
Best Arabidopsis Sequence Match ( AT2G27370.1 )
(BLAST)
001: MDIEKAGSRR EEEEPIVQRP KLDKGKGKAH VFAPPMNYNR IMDKHKQEKM SPAGWKRGVA IFDFVLRLIA AITAMAAAAK MATTEETLPF FTQFLQFQAD
101: YTDLPTMSSF VIVNSIVGGY LTLSLPFSIV CILRPLAVPP RLFLILCDTV MMGLTLMAAS ASAAIVYLAH NGNSSSNWLP VCQQFGDFCQ GTSGAVVASF
201: IAATLLMFLV ILSAFALKRT T
Arabidopsis Description
CASP3Casparian strip membrane protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQI2]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.