CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, endoplasmic reticulum, vacuole

Predictor Summary:

plastid 1
endoplasmic reticulum 2
plasma membrane 3
extracellular 1
golgi 1
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89581	Soybean	plasma membrane	97.31	97.31
KRH70770	Soybean	plasma membrane	65.59	65.59
KRH74901	Soybean	cytosol, plasma membrane, vacuole	31.72	64.84
KRH74902	Soybean	endoplasmic reticulum, extracellular	23.66	62.86
PGSC0003DMT400064736	Potato	plasma membrane	57.53	56.91
Solyc02g067190.2.1	Tomato	extracellular, plasma membrane	52.69	55.68
PGSC0003DMT400003379	Potato	cytosol, plasma membrane, vacuole	50.54	52.51
KRH72259	Soybean	cytosol, plasma membrane, vacuole	45.16	43.08
KRH32783	Soybean	cytosol, plasma membrane, vacuole	43.01	40.82
KRH72258	Soybean	plasma membrane	41.94	40.21
KRH72260	Soybean	plasma membrane	41.4	39.69
KRH32784	Soybean	plasma membrane	40.86	38.97
KRH32782	Soybean	cytosol, plasma membrane, vacuole	40.32	38.66
KRH72256	Soybean	cytosol, plasma membrane, vacuole	41.4	38.5
KRH32785	Soybean	cytosol, plasma membrane, vacuole	40.32	37.5
KRH22659	Soybean	cytosol, peroxisome, plasma membrane	39.25	33.49
KRH26660	Soybean	cytosol, plasma membrane, plastid	38.17	32.57
KRG94419	Soybean	cytosol, peroxisome, plasma membrane	37.63	32.41
Solyc02g088160.2.1	Tomato	cytosol	29.57	24.02
Os02t0578366-00	Rice	plasma membrane	8.6	7.96
CDY33770	Canola	plasma membrane	1.08	1.03
Bra026853.1-P	Field mustard	plasma membrane	1.08	1.03
AT1G14160.1	Thale cress	peroxisome, plasma membrane, vacuole	1.08	0.96

Protein Annotations

EntrezGene:100786681	MapMan:35.1	EMBL:ACUP02012224	InterPro:CASP/CASPL	InterPro:CASP_dom	EnsemblPlantsGene:GLYMA_20G033700
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0016020
GO:GO:0016021	GO:GO:0051536	UniProt:I1NDP1	EnsemblPlants:KRG89579	ProteinID:KRG89579	ProteinID:KRG89579.1
ProteinID:KRG89580.1	PFAM:PF04535	PANTHER:PTHR11615	PANTHER:PTHR11615:SF81	TIGRFAMs:TIGR01569	TMHMM:TMhelix
UniParc:UPI000233DBB7	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:-:4584879..4586981

Molecular Weight (calculated)

20238.1 Da

IEP (calculated)

10.458

GRAVY (calculated)

0.718

Length

186 amino acids

Sequence
(BLAST)

001: MKASAVESSE ISKGAPPRKG LIRGLSIMDF ILRIVAAIAT LGSALGMGTT RQTLPFSTQF VKFRAVFSDL PTFVFFVTSN SIVCGYLVLS LVLSFFHIVR
101: SAAVKSKVLQ VFLDTVMYGL LTTGASAATA IVYEAHYGNS NTNWFPFCRQ YNRFCKQISG SLIGSFIAVV LFIILILMSA ISISKH

Best Arabidopsis Sequence Match ( AT5G15290.1 )
(BLAST)

001: MKSGQAEIME TSKGIQKSGL MSRRIAILEF ILRIVAFFNT IGSAILMGTT HETLPFFTQF IRFQAEYNDL PALTFFVVAN AVVSGYLILS LTLAFVHIVK
101: RKTQNTRILL IILDVAMLGL LTSGASSAAA IVYLAHNGNN KTNWFAICQQ FNSFCERISG SLIGSFIAIV LLILLILLSA IALSRRH

Arabidopsis Description

CASP5Casparian strip membrane protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXF3]
SUBAcon: [cytosol,plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.