Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 3
- peroxisome 1
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33770 | Canola | plasma membrane | 100.0 | 100.0 |
| AT1G14160.1 | Thale cress | peroxisome, plasma membrane, vacuole | 81.03 | 75.6 |
| Os02t0578366-00 | Rice | plasma membrane | 29.74 | 28.86 |
| Bra005299.1-P | Field mustard | peroxisome, plasma membrane, vacuole | 3.08 | 3.66 |
| Bra017260.1-P | Field mustard | plasma membrane | 3.08 | 3.31 |
| Bra017259.1-P | Field mustard | plasma membrane | 3.08 | 2.97 |
| Bra023049.1-P | Field mustard | cytosol, plasma membrane, vacuole | 3.08 | 2.91 |
| KRH70770 | Soybean | plasma membrane | 2.56 | 2.69 |
| Bra034831.1-P | Field mustard | cytosol, plasma membrane, vacuole | 2.05 | 1.99 |
| Bra001409.1-P | Field mustard | cytosol, plasma membrane, vacuole | 2.05 | 1.96 |
| Bra041024.1-P | Field mustard | cytosol, plasma membrane, vacuole | 2.05 | 1.96 |
| Solyc02g067190.2.1 | Tomato | extracellular, plasma membrane | 1.54 | 1.7 |
| PGSC0003DMT400003379 | Potato | cytosol, plasma membrane, vacuole | 1.54 | 1.68 |
| Bra006295.1-P | Field mustard | cytosol, plasma membrane, vacuole | 1.54 | 1.6 |
| PGSC0003DMT400064736 | Potato | plasma membrane | 1.54 | 1.6 |
| Bra000515.1-P | Field mustard | plasma membrane | 1.54 | 1.36 |
| Bra034349.1-P | Field mustard | plasma membrane | 1.54 | 1.36 |
| Solyc02g088160.2.1 | Tomato | cytosol | 1.54 | 1.31 |
| KRG89581 | Soybean | plasma membrane | 1.03 | 1.08 |
| KRG89579 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 1.03 | 1.08 |
| Bra008708.1-P | Field mustard | plasma membrane | 1.03 | 1.07 |
| Bra005298.1-P | Field mustard | plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Bra026853.1 | EnsemblPlants:Bra026853.1-P | EnsemblPlantsGene:Bra026853 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:CASP/CASPL | InterPro:CASP_dom | PANTHER:PTHR11615 | PANTHER:PTHR11615:SF81 |
| PFAM:PF04535 | TIGRFAMs:TIGR01569 | TMHMM:TMhelix | UniParc:UPI0002542E13 | UniProt:M4EDJ3 | MapMan:35.1 |
Description
AT1G14160 (E=2e-090) | integral membrane family protein
Coordinates
chrA09:+:33988050..33988957
Molecular Weight (calculated)
20702.7 Da
IEP (calculated)
8.645
GRAVY (calculated)
0.716
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEAKQIEVG ETSSSTPSRK VITLEPKLVI KKGISTLGFV FRLFAVFGTI GSALAMGTTQ ESVVSLTQLV LLKAKYSDLP TLMFFVVANA VAGGYLVLSL
101: PVSIFHIIST KAKTSRIILL AIDTVMLALV SCGASAATST VYLAHEGNTT ANWPPICQQF DGFCERISGS LIGSFCAVIL LMLVVINSGI SLSRH
101: PVSIFHIIST KAKTSRIILL AIDTVMLALV SCGASAATST VYLAHEGNTT ANWPPICQQF DGFCERISGS LIGSFCAVIL LMLVVINSGI SLSRH
001: MEEAKHNEAE EAQGIEAREA KQIEAGETSR SSRKLITFEP KLVINKGISV LGFVLRLFAV FGTIGSALAM GTTHESVVSL SQLVLLKVKY SDLPTLMFFV
101: VANAISGGYL VLSLPVSIFH IFSTQAKTSR IILLVVDTVM LALVSSGASA ATATVYLAHE GNTTANWPPI CQQFDGFCER ISGSLIGSFC AVILLMLIVI
201: NSAISLSRH
101: VANAISGGYL VLSLPVSIFH IFSTQAKTSR IILLVVDTVM LALVSSGASA ATATVYLAHE GNTTANWPPI CQQFDGFCER ISGSLIGSFC AVILLMLIVI
201: NSAISLSRH
Arabidopsis Description
CASP-like protein 1A1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI72]
SUBAcon: [peroxisome,vacuole,plasma membrane]
SUBAcon: [peroxisome,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.