Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026853.1-P | Field mustard | plasma membrane | 75.6 | 81.03 |
| CDY33770 | Canola | plasma membrane | 75.6 | 81.03 |
| Os02t0578366-00 | Rice | plasma membrane | 24.4 | 25.37 |
| AT2G36100.1 | Thale cress | cytosol, plasma membrane, vacuole | 2.87 | 2.91 |
| AT2G27370.1 | Thale cress | cytosol, peroxisome, plasma membrane | 2.87 | 2.71 |
| AT5G06200.1 | Thale cress | cytosol, plasma membrane, vacuole | 2.39 | 2.48 |
| AT3G11550.1 | Thale cress | cytosol, plasma membrane, vacuole | 2.39 | 2.45 |
| KRH70770 | Soybean | plasma membrane | 1.91 | 2.15 |
| Solyc02g088160.2.1 | Tomato | cytosol | 1.91 | 1.75 |
| Solyc02g067190.2.1 | Tomato | extracellular, plasma membrane | 1.44 | 1.7 |
| PGSC0003DMT400003379 | Potato | cytosol, plasma membrane, vacuole | 1.44 | 1.68 |
| AT5G15290.1 | Thale cress | cytosol, plasma membrane, vacuole | 1.44 | 1.6 |
| PGSC0003DMT400064736 | Potato | plasma membrane | 1.44 | 1.6 |
| KRG89579 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 0.96 | 1.08 |
| KRG89581 | Soybean | plasma membrane | 0.96 | 1.08 |
Protein Annotations
| MapMan:35.1 | EntrezGene:837975 | ProteinID:AAD39301.1 | ProteinID:AEE29113.1 | EMBL:AK117303 | ArrayExpress:AT1G14160 |
| EnsemblPlantsGene:AT1G14160 | RefSeq:AT1G14160 | TAIR:AT1G14160 | RefSeq:AT1G14160-TAIR-G | EnsemblPlants:AT1G14160.1 | TAIR:AT1G14160.1 |
| EMBL:BT006211 | InterPro:CASP/CASPL | InterPro:CASP_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0051536 | RefSeq:NP_172868.1 |
| PFAM:PF04535 | PANTHER:PTHR11615 | PANTHER:PTHR11615:SF81 | UniProt:Q9XI72 | TIGRFAMs:TIGR01569 | TMHMM:TMhelix |
| UniParc:UPI00000AC151 | SEG:seg | : | : | : | : |
Description
CASP-like protein 1A1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI72]
Coordinates
chr1:-:4840562..4841848
Molecular Weight (calculated)
22404.5 Da
IEP (calculated)
7.042
GRAVY (calculated)
0.568
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEAKHNEAE EAQGIEAREA KQIEAGETSR SSRKLITFEP KLVINKGISV LGFVLRLFAV FGTIGSALAM GTTHESVVSL SQLVLLKVKY SDLPTLMFFV
101: VANAISGGYL VLSLPVSIFH IFSTQAKTSR IILLVVDTVM LALVSSGASA ATATVYLAHE GNTTANWPPI CQQFDGFCER ISGSLIGSFC AVILLMLIVI
201: NSAISLSRH
101: VANAISGGYL VLSLPVSIFH IFSTQAKTSR IILLVVDTVM LALVSSGASA ATATVYLAHE GNTTANWPPI CQQFDGFCER ISGSLIGSFC AVILLMLIVI
201: NSAISLSRH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.