CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, peroxisome

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22659	Soybean	cytosol, peroxisome, plasma membrane	51.39	50.92
KRH26660	Soybean	cytosol, plasma membrane, plastid	50.46	50.0
VIT_06s0080g00840.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	45.83	49.25
KRH32782	Soybean	cytosol, plasma membrane, vacuole	43.52	48.45
KRH72258	Soybean	plasma membrane	43.06	47.94
KRH32784	Soybean	plasma membrane	43.06	47.69
KRH72260	Soybean	plasma membrane	42.59	47.42
KRH72259	Soybean	cytosol, plasma membrane, vacuole	42.59	47.18
KRH72256	Soybean	cytosol, plasma membrane, vacuole	43.06	46.5
KRH32785	Soybean	cytosol, plasma membrane, vacuole	42.59	46.0
VIT_08s0007g02880.t01	Wine grape	cytosol, plasma membrane, vacuole	44.44	45.93
KRH32783	Soybean	cytosol, plasma membrane, vacuole	41.67	45.92
GSMUA_Achr8P07780_001	Banana	plasma membrane	42.59	44.66
Solyc06g074230.2.1	Tomato	cytosol, plasma membrane, plastid, vacuole	41.67	42.86
PGSC0003DMT400015067	Potato	plasma membrane	41.67	42.65
GSMUA_Achr3P22600_001	Banana	cytosol, plasma membrane, vacuole	42.59	40.71
KRH70770	Soybean	plasma membrane	34.72	40.32
KRH74902	Soybean	endoplasmic reticulum, extracellular	12.96	40.0
KRG89581	Soybean	plasma membrane	32.41	37.63
KRG89579	Soybean	endoplasmic reticulum, plasma membrane, vacuole	32.41	37.63
TraesCS7D01G324700.1	Wheat	cytosol, plasma membrane, plastid, vacuole	38.43	37.56
HORVU7Hr1G078490.1	Barley	cytosol, plasma membrane, plastid, vacuole	38.43	37.39
TraesCS7B01G228600.1	Wheat	cytosol, plasma membrane, plastid, vacuole	38.43	37.39
TraesCS7A01G327900.1	Wheat	plasma membrane	37.96	36.77
KRH74901	Soybean	cytosol, plasma membrane, vacuole	15.28	36.26
Zm00001d052757_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	36.57	35.59
EES11679	Sorghum	plastid	37.5	35.37
Zm00001d001779_P001	Maize	extracellular	37.04	35.09
EES13180	Sorghum	plastid	37.04	34.04
TraesCS2B01G400200.1	Wheat	cytosol, plasma membrane, plastid, vacuole	34.72	33.48
Os08t0101900-00	Rice	cytosol, peroxisome, vacuole	26.85	30.37
TraesCS2D01G379300.1	Wheat	cytosol, plasma membrane, plastid, vacuole	35.19	29.57
TraesCS2A01G383000.1	Wheat	cytosol, plasma membrane, plastid, vacuole	35.19	29.34
HORVU2Hr1G089180.1	Barley	plastid	35.19	29.34

Protein Annotations

MapMan:35.1	EMBL:ACUP02011956	InterPro:CASP/CASPL	InterPro:CASP_dom	EnsemblPlantsGene:GLYMA_19G083200	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0016020	GO:GO:0016021
GO:GO:0051536	UniProt:K7MX96	EnsemblPlants:KRG94419	ProteinID:KRG94419	ProteinID:KRG94419.1	PFAM:PF04535
PANTHER:PTHR11615	PANTHER:PTHR11615:SF222	TIGRFAMs:TIGR01569	TMHMM:TMhelix	UniParc:UPI0002965C98	SEG:seg

Description

hypothetical protein

Coordinates

chr19:-:30112743..30115147

Molecular Weight (calculated)

23162.1 Da

IEP (calculated)

8.643

GRAVY (calculated)

0.520

Length

216 amino acids

Sequence
(BLAST)

001: MKSEVSAVTR VVDKNKGIDK GKGVTWAVSV SEKDSFSSTK AAPFSRWKKG IAVTDFVLRL GAIGAAMGSA VTMGTNEEQL PFFTQFLQFH AQWSDFPVFQ
101: FFVFANGVIS GYAILSLPFS YVCIVQPHAV RPRLLLMTFD TLGTQVMMGL ISVAAAGAAA IVYVGHNGSQ DANWMAFCQG FTNFCQAASE AVVLSFVAAA
201: FFLCLVPLSA LALKSN

Best Arabidopsis Sequence Match ( AT2G27370.1 )
(BLAST)

001: MDIEKAGSRR EEEEPIVQRP KLDKGKGKAH VFAPPMNYNR IMDKHKQEKM SPAGWKRGVA IFDFVLRLIA AITAMAAAAK MATTEETLPF FTQFLQFQAD
101: YTDLPTMSSF VIVNSIVGGY LTLSLPFSIV CILRPLAVPP RLFLILCDTV MMGLTLMAAS ASAAIVYLAH NGNSSSNWLP VCQQFGDFCQ GTSGAVVASF
201: IAATLLMFLV ILSAFALKRT T

Arabidopsis Description

CASP3Casparian strip membrane protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQI2]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.