Factsheet for GSMUA_Achr8P07780_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
cytosol 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P22600_001	Banana	cytosol, plasma membrane, vacuole	71.36	65.04
VIT_06s0080g00840.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	57.28	58.71
VIT_08s0007g02880.t01	Wine grape	cytosol, plasma membrane, vacuole	57.28	56.46
PGSC0003DMT400015067	Potato	plasma membrane	55.34	54.03
Solyc06g074230.2.1	Tomato	cytosol, plasma membrane, plastid, vacuole	53.88	52.86
TraesCS7D01G324700.1	Wheat	cytosol, plasma membrane, plastid, vacuole	54.37	50.68
HORVU7Hr1G078490.1	Barley	cytosol, plasma membrane, plastid, vacuole	54.37	50.45
TraesCS7B01G228600.1	Wheat	cytosol, plasma membrane, plastid, vacuole	53.88	50.0
TraesCS7A01G327900.1	Wheat	plasma membrane	53.88	49.78
Zm00001d001779_P001	Maize	extracellular	53.4	48.25
EES11679	Sorghum	plastid	51.46	46.29
TraesCS2B01G400200.1	Wheat	cytosol, plasma membrane, plastid, vacuole	49.51	45.54
Zm00001d052757_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	48.54	45.05
KRH22659	Soybean	cytosol, peroxisome, plasma membrane	47.57	44.95
KRH26660	Soybean	cytosol, plasma membrane, plastid	46.6	44.04
EES13180	Sorghum	plastid	50.0	43.83
KRG94419	Soybean	cytosol, peroxisome, plasma membrane	44.66	42.59
Os08t0101900-00	Rice	cytosol, peroxisome, vacuole	37.38	40.31
HORVU2Hr1G089180.1	Barley	plastid	50.0	39.77
TraesCS2A01G383000.1	Wheat	cytosol, plasma membrane, plastid, vacuole	49.51	39.38
TraesCS2D01G379300.1	Wheat	cytosol, plasma membrane, plastid, vacuole	48.54	38.91

Protein Annotations

EnsemblPlants:GSMUA_Achr8P07780_001	EnsemblPlants:GSMUA_Achr8T07780_001	EnsemblPlantsGene:GSMUA_Achr8G07780_001	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0016020	GO:GO:0016021	InterPro:CASP/CASPL	InterPro:CASP_dom	PANTHER:PTHR11615	PANTHER:PTHR11615:SF116
PFAM:PF04535	SEG:seg	TIGRFAMs:TIGR01569	TMHMM:TMhelix	UniParc:UPI000296DF2D	UniProt:M0TNI1
MapMan:35.1	:	:	:	:	:

Description

UPF0497 membrane protein 5 [Source:GMGC_GENE;Acc:GSMUA_Achr8G07780_001]

Coordinates

chr8:+:5207296..5208138

Molecular Weight (calculated)

22034.2 Da

IEP (calculated)

9.016

GRAVY (calculated)

0.843

Length

206 amino acids

Sequence
(BLAST)

001: MNTSEATAIA NEGSDASRKA PLAAPARFPF FLRKTGADGG WQRGVALFEF ILRLCGIAAT LVAAITMGTT NETLPFFTEF FQFHANFADL PALTFFVVAN
101: AIAAGYLVLS LPFSLAIMVR PRAIGPRLLL FICDTVMVAL TTAAASAAAA IVYLAHNGDA KANWIAICLR FDGFCQRISG AVVASFIAVV FFFVLVVMSA
201: LVMRKH

Best Arabidopsis Sequence Match ( AT2G27370.1 )
(BLAST)

001: MDIEKAGSRR EEEEPIVQRP KLDKGKGKAH VFAPPMNYNR IMDKHKQEKM SPAGWKRGVA IFDFVLRLIA AITAMAAAAK MATTEETLPF FTQFLQFQAD
101: YTDLPTMSSF VIVNSIVGGY LTLSLPFSIV CILRPLAVPP RLFLILCDTV MMGLTLMAAS ASAAIVYLAH NGNSSSNWLP VCQQFGDFCQ GTSGAVVASF
201: IAATLLMFLV ILSAFALKRT T

Arabidopsis Description

CASP3Casparian strip membrane protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQI2]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.